| Annotation |
|---|
| Description | jgi|Araly1|940314|scaffold_600858.1 |
| Sequence |
CAAAATCATC CTCTCCGACG TGATGGAAAC AGAAGCGGTG GTTAGTACCG TCGCCGGCGT CGACTGTTTC GTTTCACTCC CTCGTCAATT ACTCCACGCG CTTCAATCCA CTAGCTCCTC TCCTCTTCCT CCGCTTCTTC CTGTCGAGTT ACGCTCCGGT GACCGCCGTT GGTCAGTTGC TTGGTCCGGC TCTAGCTCCT CCTCTTCTGC GATCGAGGTC GCTCGAGTGT TTGCGGAAAC CATTTCGTTG CCGGATGGTA CAGTTGTTCA AGTTCGTGTT CTTCCTAATG TTCCCAAGGC TACATTAGTA ACAGTTGAAC CAGAGACTGA AGATGACTGG GAAGTTCTTG AGCTCAATGC AGAACTTGCC GAGGCAGCTA TACTTAGTCA GGTGAGGATA CTACATGAGA CCATGAAATT CCCTTTGTGG TTGCATGACC GAACTGTGAT AAGCTTTGCA GTGGTTTCAA CATTTCCATC AAAAGGGGTG GTACAACTTG TGCCAGGAAC TGAAGTGGCT GTGGCTCCAA AGAGGCGTGA CAGAAATCTC AAAGCAAAAA AGAGTCAGGA AAAAGAAAGC ACCAATGTCA AGGCTCTATT ACGCGTACAA GATACTGGTA GATCAGCCTT TCGTGAAGCT GATGTCAAAG GATTTGAGCT AAGGGTAGCC CTCACTTCTG TTGCCTACAT TCATCCAGAA ACTGCCAAGA ATTACTCTCT AGAATCTCTT CAGTTGATTT CTGTATCCCC TAGAATACCT TTGAAAGGTA CTGCAAAAAA GGATGAAGCC TTAAATATCA AAAACAGTGA AGCTTCAAAG GTGGCCGAGA ATGGTACTTC AAGTGCAAAG AAAGAGCCCC GTCAAGCAAT TCTTCGTCTT GTCTTTTCGG ATTTAGCTGC TAAAGGACAT CTAATGATGG TCGAGTCTCT TCGTCTCTAT CTCGGAGCAG GCCTACACTC ATGGGTTTAC TTAAGGGGAT GCAATGTGAA TGAAAACAAA GAAACTCCTG CTCTTTCACT TTCTCCTTGC GTCTTCAAGA TTTCTGAAAA TGAAAAGGTG CTGGATAGGG GTACAGATAT GCTTGGTAAT CATAATTCTA TTAGAAATTG CAGTCATCCA CCGTCTGGCT TGAGCACCTA TATGGATGTT GTCGACTGGT CTGTTCACGA TAAGGTTGTT ACAGCTCTTT CATCTGAGGG TTTGCATGAC AAAGGAAATC AAGTTAATGC CTATCAAGTT AAGAATAAGA AAAAGTTGGA ATGCCTTACT CGCCTGTGGT CATTGGCACA GCTTGATGCT ATTGCGTCAG TCACAGGAGT TGATGTTAGT TCGTTAATTG TAGGAAGAGA AACGTTTTTC CACTTCGAAG TAAGAGGGCC TGAATCGTAT AAATTCAGAG ACGGGCAGCC TTCTGTTAAT GATCGTTGGG AAAGTGGGAA GAAGGATAAA AACACTCCTT TAGAAATTTT GTATGTCATG ACGGTCTCTG ACGAGTCTTT GCTTGGTGAT AAATTCGCTG GGTATGATCT TAGCCTGGAT AGAAGTGAGA AGAGCGGCAA TGTGGTGCAT ATTGAGCCAG TGCTTGAGAA GATGAATCTT GGCGACCCTA TATATTTAAC GTCAGCTAAA GAAACACACT GCAATAAAGG TGTTTCCCCG GATATATCCT CCTTGACGTG GATGGGCCCA ATCGTGTCGG ATGTTATCAA GAGAATGACC GTGTTGTTGT CTCCTGCAGC TGGAATGTGG TTTAGCAAGT TCAAGATTCC ATCACCTGGA CATATTCTGA TATATGGGCC TCCTGGTTCA GGAAAGACAA TATTGGCAAG AGCTGCTGCA AAGTACTTCG AAGAACAGAA AGACTTGTTG GCACATGTGA TTTTAGTATC CTGTTCTACA CTTGCCTTGG AGAAGGTTCA ACACATCCAT CAAGTCCTTT CTAGTGTAAT AGCTGAGGGC TTGGAACATG CACCATCCGT CATCATTTTG GATGATCTCG ATAGCATTAT CTCATCGTCT TCAGATACTG AAGGAACACA AGCTTCGGTT GGGGTTACGA TGCTTACAAA ATTCGTAACA GATGTTATAG ATGATTATGG GGAATACAGG AATTTCTCTT GTGGAATTGG CCCACTTGCA TTCGTTGCTT CTGTCCAGTC TCTAGAGCAA ATTCCACAGA CATTGAGCTC ATCAGGACGG TTTGATTTCC ATGTACAACT GGCTGCTCCT GCTACCTCGG AACGTGGGGC CATACTGAAG CATGAGATAC AGAAACGCCT TTTAGACTGT TCAGAAGACA TATTGCTTGA CTTAGCTGCT AAATGTGAAG GATATGATGC ATATGACCTG GAAATATTGG TTGATAGAGC TGTTCATGCT GCCATTGGCC GGCATCTACC TTGTGAATCA AATATATCCA AATATAATTT GGTTAAAGAA GACTTTACTC GAGCTATGCA TGATTTTGTG CCTGTTGCCA TGCGTGACAT CACAAAATCC GCCTCTGAAG GTGGTCGTTT GGGGTGGGAA GATGTGGGAG GTGTGACTGA TATTAAAAAT GCTATAAAAG AGATGATTGA GCTGCCATCA AAATTTCCAA AAATCTTTGC AAAATCTCCT CTGCGTTTGA GATCGAATGT TCTCTTGTAT GGCCCACCCG GTTGTGGGAA GACTCACATT GTTGGTGCAG CTGCTGCAGC GTGTTCCCTA CGGTTTATAT CGGTAAAGGG GCCTGAGCTG TTAAACAAAT ACATTGGTGC ATCTGAACAA GCGGTCCGTG ATATATTTTC AAAAGCAGCA GCTGCAGCAC CATGCATACT CTTTTTCGAT GAATTCGATT CAATTGCTCC CAAGAGAGGA CATGATAATA CTGGTGTAAC TGATCGAGTT GTTAATCAAT TTTTGACAGA ACTGGATGGA GTTGAAGTTC TAACCGGTGT CTTTGTATTT GCTGCAACCA GTAGACCAGA TCTACTTGAT CCTGCACTCC TAAGGCCTGG CCGGCTTGAT CGTCTTCTTA TGTGCGACTT TCCTTCCCCA CCAGAACGAT TAGATATTCT TACTGTTCTT TCTAGAAAGC TTCCAATGGC TGATGATATT GACTTAGAGC CTATAGCTTT GATGACTGAA GGCTTCAGTG GAGCTGATCT TCAAGCTCTT CTCTCAGATG CGCAACTTGC AGCTGTACAC GAGTATCTGA ACAGAGAAGA TAAACCTGAG ACCGGAACTA CGCCAATAAT AACCGATCCT CTTTTGAAGT CGATCGCTTC TAAAACTAAA CCATCAGTTT CCGAAACCGA GAAACAAAAG CTCTATGACA TATATAGCCA GTTTCTGGAT TCAAGAAAAT CGACAAGAGA AGCAAAGGGC AAAAGGGCAA CCTTAGCATA ATCAAAGGTA TTACAAAGAC A |
| Length | 3411 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 3197137.. 3203962 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G08470.1 |
| Description | peroxisome 1 |
| TAIR curator summary | an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals. |
| Alias | [EMB2817][PEX1][EMBRYO DEFECTIVE 2817][peroxisome 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.47214 |
Ahg947658 | Ataxia telangiectasia-mutated and RAD3-related |
| 9.79796 |
Ahg473323 | Arp2/3 complex, 34 kD subunit p34-Arc |
| 9.79796 |
Ahg476390 | ARM repeat superfamily protein |
| 13.0384 |
Ahg359673 | BRCT domain-containing DNA repair protein |
| 16.9706 |
Ahg888078 | Protein of unknown function (DUF3414) |
| 17.4929 |
Ahg484762 | Pentatricopeptide repeat (PPR) superfamily protein |
| 23.8747 |
Ahg489653 | DNA-binding family protein |
| 25.865 |
Ahg474984 | Protein of unknown function (DUF3741) |
| 25.8844 |
Ahg930907 | Pentatricopeptide repeat (PPR) superfamily protein |
| 30.133 |
Ahg931380 | Protein of unknown function (DUF810) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|