Detail



ID : Ahg947820

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947820|scaffold_704049.1
Sequence
CTTTCTTGCC ACATTGTTGA ACATGTCGAA CAGAAGATCA AGACAATCTT CAAGTGCTCC AAGGATCTCC GATGATCAAA TGATTGACCT CGTAACTAAG CTCCGTCAAA TTTTGCCGGA GATTGGCCAA CGACGTCGTT CTGATAAGGT ATCAGCGTCG AAAGTATTGC AAGAGACATG CAATTACATA CGAAATTTGA ACAGAGAAGT TGACAATCTC AGCGAGCGTT TGTCTCAGCT TCTCGAATCT GTCGATGAAG ATAGCCCTGA AGCCGCCGTT ATTAGAAGCC TACTCATGTA ATCTTTTTTT TGTTTTTGTT T 
Length321
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21536653.. 21537326
Download Sequence
A.thaliana
AGI-codeAT5G39860.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding family protein
TAIR curator summaryEncodes PRE1 (PACLOBUTRAZOL RESISTANCE1). PRE1 and IBH1 form a pair of antagonistic HLH/bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation. BNQ1 is directly and negatively regulated by AP3 and PI in petals.Required for appropriate regulation of flowering time.
Alias[BHLH136][BNQ1][PRE1][BASIC HELIX-LOOP-HELIX PROTEIN 136][BANQUO 1][PACLOBUTRAZOL RESISTANCE1]
Gene coexpression
MR
MR Locus Description
22.6274 Ahg919854 Pectin lyase-like superfamily protein
25.4165 Ahg918720 Fatty acid hydroxylase superfamily
28.8964 Ahg470654 Fatty acid desaturase family protein
37.1483 Ahg494417 GDSL-like Lipase/Acylhydrolase superfamily protein
39.1535 Ahg899139 Homeodomain-like superfamily protein
40.6448 Ahg471186 Pectin lyase-like superfamily protein
48.5798 Ahg495618 MBOAT (membrane bound O-acyl transferase) family protein
53.3104 Ahg488668 SAUR-like auxin-responsive protein family
53.6656 Ahg482579 ovate family protein 15
73.8309 Ahg495501 protochlorophyllide oxidoreductase A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression