| Annotation |
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| Description | jgi|Araly1|947885|scaffold_704114.1 |
| Sequence |
AATTTTCCGA TAAATAAAAG ATGAGTTCCG GCGCCGGCAG TGGAACAACC AAAGGAGGCA GAGGAAAGCC GAAAGCTACA AAGTCCGTTT CTCGATCGTC TAAAGCTGGT CTTCAGTTTC CCGTTGGAAG AATCGCTAGA TTCCTTAAAG CCGGAAAATA CGCTGAACGT GTTGGTGCCG GTGCTCCGGT TTATCTCTCC GCCGTTCTTG AGTACCTCGC CGCTGAGCTA TTGGAGCTTG CTGGAAATGC GGCAAGAGAT AACAAGAAGA CACGTATCGT ACCACGACAC ATTCAGCTTG CAGTGAGAAA CGATGAAGAG CTTAGTAAAC TTCTTGGAAG TGTAACAATC GCTAATGGAG GAGTTTTGCC TAACATTCAT CAGACACTTC TCCCATCAAA GGTTGGGAAG AACAAAGGCG ATATCGGATC CGCTTCTCAA GAGTTTTGAT TCTTATTTCT TGGTTGAAT |
| Length | 469 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 21833854.. 21834713 |
| Download Sequence |
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| A.thaliana |
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| AGI-code | AT1G54690.1 |
| Description | gamma histone variant H2AX |
| TAIR curator summary | Encodes HTA3, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10–20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin. |
| Alias | [G-H2AX][GAMMA-H2AX][H2AXB][HTA3][GAMMA H2AX][gamma histone variant H2AX][histone H2A 3] |
| Gene coexpression |
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| MR |
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| RNA-seq |
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Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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