Detail



ID : Ahg947943

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947943|scaffold_704172.1
Sequence
GTATTGTAGT TGTAGAGAGA ATGCAGAGTT TATCGAACTC AGCTCCGACA CCGGAGGCGA TATTAGAATG GTTACAGAAG GAAATGGGGT ACAGGCAATT AGGTCCGTAT AATGGATCAA GCAAATCTCA TGTTCCTTCT ATTGATGCTA TAAGGAAGAT TTGTAGAGGG AATATGATAC CTATTTGGAA TTTTTTAATA AACCGAGTGA AATCGGAGAA GACAGTGGAG AGAATTAGGC GGAACATTAC GGTTCATGGA GGAAGTAGTA ATGCTAGCAT TGGGAGTTCT GTGAATCCCG GGAAGGAGGA GAGTAAGGGT AAAGGAAGGC GGAAGGAAAA GGCAGTGACT GGGGAGAGTT CGAGTTATGC AGAGGATAGA GAGGCTGCAT TGCAGGAAAG GGAATTAGCT GCAAAGGAAG TGGAGAGGTT GAGGAACATA GTGAGGAGGC AAAGAAAAGA TTTGAAAGCT CGAATGTTGG AGGTCTCTAG AGAAGAAGCA GAACGGAAGA GGATGCTTGA CGAAAGAGCA AATTACAGAC ACAAGCAAGC ATTGTTGGAA GCTTATGATC AACAATGCGA CGAAGCAACA AGAATATTTG CAGAGTATCA CAAAAGGCTA CAAGTCTACG TTAATCAAGC AAATGATGCA CAGCGGTCTG TCAATTCATC GAATGAAGTG TTAAGCAGCC TCAGTGCTAA CAGTGAGAGG GAAGCTGTGT ATTCCACTGT CAAAGGAACT AAGTCTGCAG ATGATGTCAT TCTCATGGAA ACAACCCGAG AACGAAATAT CAGGATAGTT TGTGATTTGC TTGCATCACG CATGATTGAA AGAATACGTA ACTCCTTCCC TGCATACGAA GGAAATGGAA TTTGTTCACA TCCTGAGCTG GAAACAGCCA AGCTGGGTTT TGAATATGAT GGAGAAATAA CTGATGAGAT GAAAACTGTT ATAGTAAATT CCCTGAGGGG TCCTCCTCTG CTGCTTCAGG CTATTGCTGC ATACACTTTA CGCATTAAGA CCCTGATATC CAGAGAGATG GAGAAGATTG ATGTCAGAGC AGATGCTGAA ATGTTAAGGT ATAAGTTTGA GAACAACCGG GTAACAGACA ATTCTTCTTC TGATGTGAGC TCGCCTTTGA GTTATCAGTT TAATGGTAAT GGAAAGATAG GCACAGATAC TCATTTCCAG GGATCTAACA ACCAGCTTCT TGAACGGCAG AAAGCGCATG TTCAACAATT TTTGGCTACT GAAGATGCAC TAAACAAAGC GGCTGAAGCT CGTGATTTAT GCCAAAAATT TATTAACCGT TTGCATGGAA GTGCTGATGC AGCTACACAT TCGTTTGCTG GAGGCACAAC ACAGAATGGC AGCAATCTTA GGCAATTTGA GTTGGATGTA TGGGGAAAGG AAAGAGAAGC TGCTGGTTTG AGGGCTAGCT TAAACACATT GTTATCTGAA ATACAACGGC TGAATAAATT ATGTGCAGAA AGAAAAGAAG CCGAAGATTC CTTGAAGAAG AAGTGGAAGA AAATTGAGGA ATTTGATGCT CGCAGATCCG AACTTGAAAC CATATATACA ACTCTTCTCA AGGCTAACAT GGATGCTGTT GCATTCTGGA ATCAACAACC ACTAGCTGCA AGGGAATATG CATCAGCCAC TGTAATTCCA GCAAGTGAAG TTGTTGTGGA CATTTCAAAC AGCGCAAAAG ATTTCATTGA GAAAGAAGTG TCTGCTTTCT TTCAAAGTCC TGATAACAGT CTTTATATGC TTCCAGCAAC TCCTCAGGGA CTTCTGGAGT CTATGGGAGC TAATGGATCG ACGGGACCTG AAGCTGTTGC ATATGCAGAG AAGAATGCTG CTCTATTAAC GGCAAGAGCC GGTGCAAGAG ATCCATCAGC AATTCCATCT ATATGTCGCA TTTCTGCTGC CCTTCAATAT CCTGCAGGTC TGGAGGGTTC AGATGCAAGT TTGGCCTCAG TGTTAGAGTC TCTTGAGTTC TGCTTAAGGG TTCGTGGTTC TGAAGCATGT GTTTTAGAAG ACTTAGCAAA GGCAATCGAT TTGGTCCATA TACGGCAGGA TCTAGTTGAG AGTGGCCATT CTCTGTTAGA TCATGCTTTC CGTGCCCAGC AAAAATATGA AAGAACAACT AACTACTGCC TAGATCTAGC TTCTGAACAA GAGAATACAA TATCGGACCA ATGGTTGCCT GAACTTAGGA CTGCAGTTCA GAATGCGCAA GCTTCCTCTG AGCACTGCAA ATACGTCAGG GGCTTGCTTG ATGAATGGTG GGAACAGCCT GCAGCTACAG TTGTTGATTG GGTCACTGTA GATGGTCAAA GTGTTGCAGC TTGGCAAAAC CATGTCAAAC AGCTTCTGGC CTTTTACGAT AAAGAATCAT TGCGAACGTA AAGCCCCATC ATTTCCGCTC T 
Length2431
Protein Sequence
Protein Residue
Map Locationscaffold_7: 22133336.. 22138321
Download Sequence
A.thaliana
AGI-codeAT5G38880.1
Description
TAIR curator summary
Alias[AUG5][augmin subunit 5]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg906113 PRLI-interacting factor, putative
7.61577 Ahg489516 Uncharacterized protein
19.6469 Ahg480313 ABC-2 type transporter family protein
20 Ahg473872 CYCLIN A3;4
26.3818 Ahg929657
28.5307 Ahg896869 Protein of unknown function (DUF1336)
33.541 Ahg939889 calcium dependent protein kinase 1
36 Ahg475541
37.1483 Ahg947666
46.3465 Ahg943550 glycerol-3-phosphate acyltransferase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression