Detail



ID : Ahg948107

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948107|scaffold_704336.1
Sequence
TTCAATTTCA GGATTATTAT TATGGAGTGT GCCGCAAGCG ATGCAAATGA TTTGAGCAGC ATTCACTTGC ACAAGAGGCA ACAAACAAAG GATGAAACAC GATCGGCAAT GCTGGATCTT GATTTTCTTG ATTGCCCTAT TTGCATCGAG CCGTTCACTG TTCCTATCTT CCAGTGTGAT AATGGACATT TAGCTTGCGC TTCTTGCTGT CCCAAACTGA GTAATAAGTG CCCTACATGT ACTTTGCCTG TTGGTCACAT TCGCAGCAGA GCAATGGAGA GTGTTCTTGA ATCTATCTTT ATCCCATGCC CGAACGCCAA GTTAGGTTGC ACCACGAATG TCTCTTATGG GAAACAGTCA ATACATGAGA AGGAATGTAG CTTCTCTCTC CTCTGCTCAT GCCCTCTACA AGACTGCAAT TACACTAGCT CATACTCTAA CATGTACCGT CACTTTATTA GTGACCACCA GAACAAATAT ATGTTGTTCT GTTGTGACAC TTTCGCTAAT GTTCGGATGA ATATAAGCGA TAAGATATTG ATTAGAGTTG AATATGAGGT AAGCCTAGTG TTTGCAGTGC AATGTTTTAA GGAGCCGTGT GGTGTCTATG TAACTGTAAG CTGCATTGCA CCGTCTTTTC AAGAAGTAGG AAAATTCTCA TACCATCTCT CCTACACTGT GGATGGGCAC ACTATGACTT ACGAATCACC GAAAGTGAAG AAAGTTCTTA AAGTGAGCTA CCAAATACCT GAAGAGAGTT TCATGTTGAT CCCTCACAGT TTATTGCGTG GTGAAATTTT GGATATGAAG CTTTGCATCA AGAAGTTGAG GCAAGAGTAA GAAAAAGCTG CTTATTTATT CG 
Length862
Protein Sequence
Protein Residue
Map Locationscaffold_7: 23120707.. 23121731
Download Sequence
A.thaliana
AGI-codeAT5G37890.1
DescriptionProtein with RING/U-box and TRAF-like domains
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg491077 Arabidopsis protein of unknown function (DUF241)
3.16228 Ahg937985
7.93725 Ahg923090
12.4499 Ahg941785 F-box associated ubiquitination effector family protein
15.1987 Ahg946973 Protein of unknown function (DUF295)
17.1464 Ahg331769 low-molecular-weight cysteine-rich 83
17.6635 Ahg897864
29.5466 Ahg487976
29.9333 Ahg949550 AP2/B3-like transcriptional factor family protein
32.8634 Ahg932903
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression