Detail



ID : Ahg948309

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948309|scaffold_800196.1
Sequence
AAAAAAAAAA AAAAAAAAAA CAAAACATTA TATGTCGGAA AACCACCCTA GTTTAAAAAT CTCTCAACTT TCCAGTTTCC CGGCGAAAAC CCAGATGGCT CACGACGGTA ACGGCGATAA CAACAATGAC CCATTACACC AATACCTGTT ACCATTACCG GAGAACAACG ACGTCATGCC AATGACTCCA TCAGAATTCA AAAACCGATT ACTCTTCGGC CCATTCCCTC CGTCATCCTC CAATTCCACA GACCTCCTTA TCCCACCAAC GGGACCTAAT AAACTAACCC GGAAACCTAA ATCTTCCCAC AATCTCCACC GGTCTAAAAC AGCTCCTGCT ATGGCTGCAA TCAACGATGT ATCTCACCCA AATGATCAGA GAACAGAGCA ATCAAATTCG AAATCCATTG TAAGACAAGC TCTTGCTTTG TTCGTTGTGT ATCTCTCTGT AGGTGTGCTT ATCTATTGGC TGAATCGAGA TAACGACAAT GTGAATCAGA CTCATCTTGT TGTTGTTGCT CTGTACTTTT GTATTGTAGC AATGTGTGGA GTTTTAATTG TGCATTTTGT TGAGAAAATC GGGTGCTTGG ATTCGTTTTA TTTCTCGGTT ATGATGGTTA CAACAGTTGG GTATGGTGAC CAGGCTTTTA ATACATGGCC CGGTACGCTT CTTGCTTTGG CTAAAGCAAG AGTTGATAAG AGGAATAGAG AGCGGGCCAA GAAAGTGCTT GGTGAAAACA TGACCATCTC TGAGTTCTTT GCTGCAGATA TTGACAACAA TGGTTGCTTG AGAGTATACA ATATACAAAC TAGAGCAGAT GGAGAAAATA ACTCAAAGGA TACTATACAA ATCTGTAACC AGTTTAACAA GCTTGACCAA ACCGATAGTG GAACGATCAC TCTTTTAGAT CTCATGCAAA CCAGCACCGG TGATTTATCC ACTGCGATTT CTGTTTAGTT AACACACATT ACAACATG 
Length978
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1020677.. 1022062
Download Sequence
A.thaliana
AGI-codeAT5G46370.1
DescriptionCa2+ activated outward rectifying K+ channel 2
TAIR curator summaryEncodes AtTPK2 (KCO2), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK2 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo.
Alias[ATKCO2][ATTPK2][KCO2][CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 2][TANDEM PORE K+ CHANNEL 2][Ca2+ activated outward rectifying K+ channel 2]
Gene coexpression
MR
MR Locus Description
32.6803 Ahg893620
40.6694 Ahg490172 Ubiquitin-like superfamily protein
56.4447 Ahg907331 Mannose-binding lectin superfamily protein
88.3176 Ahg899929 Bromo-adjacent homology (BAH) domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression