Detail



ID : Ahg948377

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948377|scaffold_800264.1
Sequence
ACACAAAACT TTCTCTTACC ATGTCCTCTC ACAATCCACC AGATCAACCT TCCTCTTCTA ACTCCGGTCG CCACAAGCTA CAACCGCTTC TACCGCAAGT TAGCCGCTAC GAATCGCAGA AAAGCCGCGA TTGGAACACG TTCTTACAAT ACCTCAAAAC CCTAAACCCA CCCGTAACAA CCTCTCGATT CGAGCACACA CACGTCCTAA GCTTCCTCAA CTATTTAGAC CAATTCGGTA AAACCAAAGT CCATAATCAA GCTTGTGTTT TCTTTGGACA ACCCGATCCA CCGTCGCCTT GCACGTGTCC TCTAAAGCAA GCTTGGGGAA GCTTAGATGC TTTGATCGGA CGGTTAAGAG CTGCTTACGA AGAACATGGT GGTGGATCAT CCCATAGTAA CCCGTTCGGA AACGGGTGGA TTCGGATTCA TTTGAGGGAA GTGAGAGAGT CTCAAGCTAA GGCTCGTGGA ATCCCGTATA GGAAGAAAAG GAAACGGAAG AAGAACAGAA ACGACGTCGT TGTAAAGAAA GATATTTCAA AGTCTTCGAG TCACAATCAT AATCGTTAGT CCACTTGTAT CTCGATCAT 
Length589
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1315573.. 1316160
Download Sequence
A.thaliana
AGI-codeAT1G16910.1
DescriptionProtein of unknown function (DUF640)
TAIR curator summary
Alias[LSH8][LIGHT SENSITIVE HYPOCOTYLS 8]
Gene coexpression
MR
MR Locus Description
11.6619 Ahg939929
12.0416 Ahg935605
15.0997 Ahg923601
30 Ahg943073
30 Ahg942723
39.3065 Ahg925328
44.2606 Ahg333621 glutathione S-transferase (class phi) 5
45.4643 Ahg947330 RING/U-box superfamily protein
52.7162 Ahg907125
58.7878 Ahg936067 F-box associated ubiquitination effector family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression