Detail



ID : Ahg948440

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948440|scaffold_800327.1
Sequence
TCTCAGTGAA GGGAAGTAAG CATGGGTGAG GCAATACCAA AGGAAGTGAA GGATCTGTGG GACAAATGGA ACATACGTGG TTTGGTGATT CTCAGTCTTG CCCTTCAGAC AATCCTGGTT CTTCTCTCAC CAAACAGAAA ACGAACTCAC CGGCGTTTTT TCCGGTTGCT CATTTGGTCG GCTTACCTTT TAGCCAACTG GGCAGCAGAG TACGCGGTGG GACAGATCTC AGATAATCAA GGAAGCGAAC CGCAACCCAA GAACACCGAT CTCTTAGCTT TCTGGGCAAC TTTTCTTCTC TTGCACCTCG GTGGTCCTGA TACTATTACG GCTCTTGCTA TTGAGGACAA CGACCTTTGG CTAAGGAGCT TGTTCGGCCT TGTTTGCCAA GCAATCATCA CTCTCTACGT CTTTTTTCTC TCAATTCCAA ACAGACTTTT GGTACCTACA TCGCTCATGC TTGTAGCCGG AGTCATCAAG TATGTGGAAA GGATAAAGGC GTTGCGTGGA GCTAGTCTTG AAACCTTCAA GGACTCGATG CTCGGAGAGC CTGATCCTGG ACCGGATTAC GCAAGGCTCA TGGAGGAGTA TTCAATTAGG AAGGTGCATA AAGAGCCAAC CCGGATAATT AGGTACGAGG AGGCTGAAAA AGGTCAACGG CCCAAGGTTT TCGTGAGGCC AAATACAGAG CTGACGGATC TAGAGGCTGT CCAATACGCG TATAAGTACT TCAATATCTT TAAAGGTCTT GTGGTTGATC TCATGCTTAG CTCTCAATCT GAGGAGTTGA ACAACAGCAA AGAATTTTTC ATCTTATCAA CACCAGAGGA AGCTTTGAGG GTTTTAGAGG TAGAGCTCAG CTTCATCTAT GGCACCTTTT ACACCAAAGT AAACATTCTG CATACCTGGA TTGGAATTTC TTTCCGCCTC ATTGCCCTAG CATCCCTTGT GTCATCCCTC TGCATTTTCG CAACGATGAA GAAATCTGAA TATGACCAGT TTGATATCGG CCTAACTTAC GTATTGCTCA TAGGTGGAAT AGCACTTGAT TTGGTTGCTA TATTCATCTT ATGTGTCTCT GACTGGACAT TTGCCAGATT TTGGAAGCCA AAGGAGGATG AGGAAGATAC GGGCACCTCA TCTTCAGTTT CAGGATTTTT CAATTGGATC CTCAGTTTCA GGAAGCTGAA GTGGAAGCCT TACGATTGTT CTCACAAAGT AAAAGGCAAT TGTCAGGTTT CTGATAGAAA ATTTATATTC CGCAGATGGT CAGAATACAT ATACTCATAC AACCTGATTG GGTACTCTCT GGGACTGAAG TCTACGAGAA TCCACAATAC CAACGGATAC ATTCACCGTT TCTTTGACGC TTTCATTCAC TCTTTGTGTA TTGATCGTGC CATCAATTGT TTCTTCAGAG GAATCGGGTT CTGTTTCAGG AACATGATAT ATGGGACTCA TCGCGTTCGC AACAGGTTGA GCAAACTCAT CTCTCGATCA TCAACGAACA ACCGGAACCT GTATTATGCA CTTTACCCAC TGAAGCTGTT TCTGAGTTTC TGGTTTGGAA TCCCAATTAT CTACTATGCC TTGGAATTTT TTGGTATCTC AGATCAGCTC AACGGGATGA TTTATACATC AAGTGATCGC ATCACAAAAG ATATGTGGGA GTTCATATTT GAAGAGGTTA AGCGTAGATC TCAAGATGCT GATAGGGCAG AGAGCGCCAA TGACATATAT TCGACAAGGG GTGAGTGGGT TCTGCGCGAT ACATCAATAG GAAAAGCTAC AAATGGGACA CTCCGCAGAA AACTGCTAAG CTACGTAACT CAAGCAGACT ATGATCAGAG CATTATTATG TGGCATATTG CTACAGAGCT CTTATACCAA ACAGAGGAAG CCCCTCAGAA GAATCAATGT TACCGCGAGT TCAGCAAAAT CCTTTCAGAC TACATGATGT ACCTCTTATT CGTTCAGCCT ACTCTGATGT CGACAGTTGC AGGAATCGAT AAGAAAAGAT TTATGGAAGC TATAGCAGAA GTTAAGAACT CTAGAGAAGC TAAAAAGTAC TTGGAGAAGA AGTACCGTGT GGATTCAGAC CAAGAGCTGC TCTGCAAAGA GATTTTATCT TCTGTCGAGG AATTTAGCGA AAAAAAAGGC AAGAGGTATC AACGCAAGAA TGTGCTAGCT GATGCAAGTA AACTAGCAAA TGCGCTTAAC CAGCTAAGTA AGGAAGACGA AGAAGTGAAG TGGGAGATAG TAAGCAAAGT CTGGGTGGAG ATGCTTTGCT ATGGAGCAAC TTATTGTGAC CCGAAACAAC ATGTAGCGCA ACTGAGCAAT GGAGGGGAAT TCATCAGCTT TGTTTGGCTA TTGATGGCTC ATTTTGGCCT TGGAGACCAA TTCCAGACCA CAGAGGAGAA TGCTAGAGGC AGAATAATTG TGTCCAGATG ATCAATATAT TTATATATGC TC 
Length2472
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1669772.. 1672243
Download Sequence
A.thaliana
AGI-codeAT5G45475.1
Description
TAIR curator summaryPotential natural antisense gene, locus overlaps with AT5G45480
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg906092
2.44949 Ahg925718 beta carbonic anhydrase 5
2.44949 Ahg936902 beta carbonic anhydrase 5
2.82843 Ahg931232 Arp2/3 complex, 34 kD subunit p34-Arc
3.16228 Ahg894867
3.4641 Ahg355494 Transcriptional factor B3 family protein
4.89898 Ahg924454
5.47723 Virus3347
6.48074 Ahg925029
8.12404 Ahg911073 F-box family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression