Detail



ID : Ahg948501

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948501|scaffold_800388.1
Sequence
TTGATGCTCA AACTCTTTAT ATGGACAACA ACAGCAACGA TGAGGCTAAG CACACCGTTT ATATCAGTTT CAACAAAAAT GATTCATCAG TCTCCTCTTT CATCAGCTAC CTCATCGCTG CTTTCAACCG ACAAGGAATC ATCTCTGCGT TCGTTGACGG TAAAAGCAGC CATGATGAAG CTGTCGAGAG GGAGATGGGA CCTGAAGAAT TCTCCAAATT AAGGGTGGTG GTGGTGGTTT TTTCCAAAAA CTATGCACTT CATGTGTCAT TCTTGGAAAA ACAGATTCTC GAGTACTCAT ACCGTAACAA CAACGACTTT GTGGTTGTTC CGGTGTTCTA TGGAGTCAGT ATTTCGTCCG TGAATCAACA TATGGAGAGG TTTGGTGAAG AGTTTGACGC AATCCAAAGA TCGAGGATTA AGTGGCGACC AGGCCATGAA TATGATTGTA AACGAAGGTA TAGTGAATCT GAATTTCTAG AAGAAATCGC CAATGATGTG TTTGAGCAAC TCTATCCAAC GGAAGAGATT GGGATCCAGT CACTACTAAA GGAGATAGTA GAAAACTATC TATGCAATCA ACCATGGGGC ATTCGCACTA TAGGCATTTT TGGTGAGCCT GGCATCGGAA AGACAACTCT GGCTACAGCC TTCTTTCGCC GAATTTCTCA TGGCTATGAT GATTCTTGTT TCATCAAAGA TTTTCACAAA GAATATACTG AGAAGAGACT TGAGTATTTG CCTCCTAAAT ACTTGGGTAA AACTTCAATG GAAAAGTTTG ACCTAAAAAG TTTTGATTCA CAGCCAAGCC ACCGCAAGAA GTGGGTTCTT GTTGCTCTAG ACGATGTGCA AAATGCTCAA GACGCGAAGT CATTTCTTGG TGGATGTGAT AAGTTTGGTC CAGGGAGCTT GATCATCATA ACTTCCAGAA AGAGAAAAAT TCTTGAGCAG TGCCATATGA ATAAGATTTA TGAGCTAAAA GGTCTAAATG ATGAAGATGC TCTGAAGCTG TTTACGAGAT GTGCCTTTGG GAATGGAGTG ATAGAGCAGA ATCTTCTGGA TCTTTCAAAG AGAGTGGTTG AATGTTCTGA TGGGAACCCA CGTACTCTTC GCTCATTTGC CGAGAAGCTC AAGGGCAAGG CAGTGGAAAA AATCAGTTGG ACGTTTCCTG ATGATTGTGA TGTACTCGTT GCCGACGATG GATCTTGTGA CACTGAGAAG AACACATATT TGCGCATTGT CCCCTGTGAA GAAGACGATG AAGTACACGA AAATAAGGAG CTCCAGTCAG ATCACAATGC GGTTTTGGCC ACTAGAGACA GCAATACAAT ATTTCTGACC CCATCCGACT TGTCCGCTGA ATGCGAATTT CGATCTTATT CTCAGAAGAA CCCTGGATTC GGCATTTACA ACCGCATCTC CAAGTCTCTG CCTAGTAATC TAAAGGTTTA CAGATTGGAT TATAACTCTC TGATGAGATC TTTGTATGGA CACTTACACC AAAAGCATCA TGTTCTACTA CAAGGGTTTG CTGGTGGACT TCAGAAACGT TGGAAAAGCT TCTCGAACTC GCATGATCAC GATCAGCTAG AGCATCATCT CCAACTTCTC CTTAATCTCT CTGGTGGTTG CGTTGTGACC AAAATTTGTC TAGAAGTTGT ACGGAAGACT AGGGAATCGA ATGGTAAGAA CATTAATGGC ATCAAACTAA TAAGATATGG AAATCCTGAG TTGTTGAAGA TTAAACTTGA TCGAGATCAA CCTAATGGCT TGGGTCAATA TATATCCAAT TAAAATTAAT ATTGGACAAA ACT 
Length1813
Protein Sequence
Protein Residue
Map Locationscaffold_8: 2193512.. 2196717
Download Sequence
A.thaliana
AGI-codeAT5G45240.1
DescriptionDisease resistance protein (TIR-NBS-LRR class)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.47214 Ahg915837 Pseudouridine synthase family protein
7.2111 Ahg906300 transposable element gene
7.4162 Ahg918087 Plant thionin family protein
11.8743 Ahg934565
13.4164 Ahg331300 low-molecular-weight cysteine-rich 46
20.4939 Ahg924200 RNI-like superfamily protein
20.7123 Ahg915993
21 Ahg948468
23.8118 Ahg952640 Nucleotide-diphospho-sugar transferase family protein
24.7386 Ahg947485 autophagy 3 (APG3)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression