Detail



ID : Ahg948681

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948681|scaffold_800568.1
Sequence
CTTGCATATT CGCTGCAAGG ATGGGGATTT CAAAACCACA CCCTACAATT TCTTGTATTT TGTTTTTAGT TTTTTATCTC TCATTATATT GCATAACACC AACTTCTTCA TCAGCCTCCC TCCAAGATCA ATTCATAAAC TGTGTCAAAA GAAACACGCA TGTTTCTTTT CCACTCGAGA CTACGTTATT TGCTCCTGCA AAAAACGTCT CTATGTTCAG CCAAGTCCTT GAATCAACGG CTCAAAATCT CCAGTTCTTG GCAAAATCCT TGCCTAAACC GGGATTCATA TTTAGGCCAA TTCACGAGTC TCAAGTCCAA GCTTCTATCA TCTGTTCTAA GAAACTCGGA ATTCATTTTC GTGTTAGAAG TGGCGGTCAC GATTTCGAGG CCTTGTCTTA TGTCTCACGG ATTGAAAAAC CGTTTATATT AATCGATCTG TCGAAATTGA GACAAGTCGA TGTTGATATT GAAACCAATA GTGCTTGGGT TCAACCTGGT GCTACGCTTG GTGAGCTTTA CTACAGAATT GCAGAGAAGA GCAAAGTCCA TGGATTTCCC GCGGGTTTGT GTACGAGCGT AGGCATAGGT GGGTATATGA CAGGGGGTGG ATACGGTTCC TTGATGAGGA AGTATGGTCT TGCGGGAGAT AATGTTCTAG ACGTAAAGAT GGTTGATGCA AATGGTAAAT TACTCGACAG AACCGCGATG GGTGAGGACC TATTTTGGGC GCTTAGAGGA GGCGGTGGAG CGAGTTTTGG GATAGTTCTC GCATGGAAGA TCAAGCTTGT TCCTGTTCCT GAGACCGTAA CCATCTTCAC CGTTACCAAA ACGTTAAAAC AAGACGCAAG ATTGAAGATT ATTTCTAAGT GGCAACAAAT TGCATCCAAG CTTGTCGAAG AGCTACACAT CCGATTGGTA CTCAGAGCCG TTGGAAATAA TGGAAACAAG ACTATTACAA TGTCCTATTT AGGTCAGTTT CTTGGCGAGA AAGGCACCTT GATGAAGGTT ATGGAGAAGG ATTTTCCAGA ACTAGGGTTA ACTCAAAAGG ATTGTACCGA AATGAGCTGG ATTGAATCCA CCCTTTTCCA TGGTGGATTT CCAACTGGTT CTCCTATTGA AATTTTGCTT CAACGCAAGT CGCCTTTAGG AAAAGATTAC TTCAAAGCAA CGTCAGATTT CGTTAAAGAA CCTATTCCTG TTTTAGGGCT CAAAGGAATT TTCAAAAGAT TGATTGAAGG AAAGATAGAA TTTCTCAACT GGACTCCCTA CGGTGGTATG ATGTCGAAAA TCTCTGAATC CGCGATCCCA TTTCCTCACA GAAACGGAAC CCTCTTCAAG ATTCTCTATT ACGCGAACTG GCTAGAGAAT GACAAGACAT CGATGAGTAG AAAAATCAAA TGGATCAAAG AGATATACAG TTACATGGCG CCTTATGTCT CAAGCAATCC AAGAGAAGCA TATGTGAACT ACAGAGATCT AGACTTCGGA CAGAACGAGA ACAACTCAAA GTTTAACTTC ATCGAAGCTA AAATCTGGGG AGCTAAGTAC TTCAAAGACA ATTTCAACAG ATTGGTGAAG ATTAAAACAA AGGTTGATCC GAATAACTTC TTCAGGCACG AGCAGAGTAT CCCACCTATG CCCTGAACGA AGCTAGGTTC ATGATA 
Length1666
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3181623.. 3184457
Download Sequence
A.thaliana
AGI-codeAT5G44380.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.56776 Ahg948802 Serine protease inhibitor, potato inhibitor I-type family protein
10.4881 Ahg902555 Plant invertase/pectin methylesterase inhibitor superfamily
15.3948 Ahg472780 FAD-binding Berberine family protein
16.6733 Ahg931409 myo-inositol oxygenase 2
20.9762 Ahg922138 FAD-binding Berberine family protein
21.2132 Ahg478837 GDSL-motif lipase 4
22.0907 Ahg949254 glutamate receptor 1.3
24.3311 Ahg900448
24.4949 Ahg337560 GDSL-motif lipase 3
24.8998 Ahg486481 Glycosyl hydrolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression