Detail



ID : Ahg948717

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948717|scaffold_800604.1
Sequence
TCAAGAACCC AGAAGAAGAC ATGACAAGTG AAGTTCTTCA AACAATCTCT AGTGGATCAG GTTTTGCTCA GAGCTCATCA ACTCTAGATC ATGATGAATC TCTCATCAAT CCTCCTCTTG TTAAGAAGAA GAGAAATCTC CCAGGAAATC CTGATCCGGA AGCTGAAGTG ATAGCTCTAT CCCCCAAGAC CCTGATGGCT ACAAACCGGT TCCTATGCGA GATCTGTGGC AAAGGTTTCC AAAGAGACCA AAACTTACAG CTTCATCGGC GAGGACACAA TCTTCCATGG AAGTTGAAGC AGAGGACAAG CAAAGAAGTG AGAAAACGTG TCTACGTTTG CCCCGAGAAG ACATGCGTCC ACCATCACTC CTCTAGAGCT CTAGGCGATC TCACCGGAAT CAAGAAGCAT TTCTGCCGGA AACACGGCGA GAAGAAGTGG AAGTGCGAGA AATGTGCCAA GAGATACGCA GTCCAATCTG ATTGGAAAGC TCATTCCAAG ACTTGTGGTA CTAGAGAGTA CCGTTGCGAC TGTGGCACCA TTTTTTCAAG GCGAGACAGC TTCATCACTC ATAGAGCTTT TTGCGATGCC TTAGCGGAAG AAACCGCTAA GATAAACGCA GTGTCTCATC TCAATGGTTT AGCGGCTGCT GGAGCAGCAG GATCAGTTAA TATCAACTAT CAATATCTCA TGGGAACATT CATTCCACCG CTTCAACCAT TTGTACCGCA ACCGCAAACA AATCAAAACC ATCATCATCA ACATTTTCAG CCACCACCTC CGTCGTCGCT CTCCCTATGG ATGGGACAAG ATATCGCGCC GCCTCAACCG CAACCGCAGG ACTACGACTG GGTTTTCGGA AACGCTAAGG CAGCGTATGC ATGCATTGAT AATAATAATA CTCACGCTGA GCACATTACG CAAAACGCAA ACGCAAGTTT GACCACTACT ACTACTCTCT CTGTCCCTTC TTTATTCAGC AATGACCAAC CACAAAACGC AAACGCAAAC TCAAACGTGA ATATGTCCGC AACAGCGTTA CTACAGAAAG CTGCTGAAAT TGGCGTTACT TCTACAACGA CGGCGGCGAC TAACGACCAG TCAACGTTTC TTCAAAGTTT CCCGCTTAAA TCCTCCGATC AAACCACCAC TTATGACGGT GGCGAAAAGT TCTTTGCTTT GTTCGGGTCT AACAACAACA TTGGGTTAAT GAGTCATAGT CATAATCATC AGGAGATTGA GAACGCTAGA AATGACGTTA CGGTTGCGTC TGCGTTGGAT GAATTACAGA ATTACCCTTG GAAACGTAGA AGAGTTGATG GTGGAGGAGG AGCTGGAGGA GGGCAAACTC GGGATTTCCT CGGGGTCGGT GTACAAACGT TGTGCCATCC ATCGTCTATC AATGGATGGA TTTGAAACAG TTTATATAAA TAACGAAAAA GA 
Length1442
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3395717.. 3398344
Download Sequence
A.thaliana
AGI-codeAT5G44160.1
DescriptionC2H2-like zinc finger protein
TAIR curator summary
Alias[AtIDD8][IDD8][NUC][INDETERMINATE DOMAIN 8][nutcracker]
Gene coexpression
MR
MR Locus Description
30.7571 Ahg939945
50.5173 Ahg933572 NAD(P)-binding Rossmann-fold superfamily protein
62.2415 Ahg493465 Regulator of chromosome condensation (RCC1) family protein
63.616 Ahg495722 expansin A14
70.746 Ahg894281 ferric reduction oxidase 4
82.6317 Ahg922640 KAR-UP F-box 1
91.5969 Ahg925925 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression