Detail



ID : Ahg948729

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948729|scaffold_800616.1
Sequence
TTAGTATCCA CCATTTCGCC AATGTCTTCA CCAGAGAAGA AGAGGAAGAA GACCTCGACG ACTAAGAAAC CGTCGCTACA ATCAATCGAG AATCCATCAC TTCCTGATGA TTTGGTATTG AGCTGTTGCA CAGAGAGTTG TCTTTATGTG TGCTTACTGT TCCCTCCTGA CCCGAACCCT TGCTGGTCCA CCCTTTGGAA GAAACTTGAT CGAACCTCAA CGGAATACAT CATTAAGAAG AAGAATAAGT CAAGTGAGTA TGTTTTGGCT ACAGTACCCA TTCCCCATTC TCCTCCTGCG TGTCGGTCAG GTCTCGTGGC GGTTGGTTCT GATATTTACA ACATGCGCCG TCATCTAGCT CCAAACATGC ATGTGGAGCG GATGTATCCG TCTGCTACTG TCGTTGATGA AAAGATTTAT GTAGCAGGAG GATGCCCAAA TGGTGATCTC TCGATTGAAG TTTTCGATGC AAAGACTCAA ATTTGGAATC TTGTGCCCAG CCCTTACTGG GACTGTGGAA TGGGAGTCTA TATCCAATTA TCCATTAAAG GAAGGTTCCA CCTTATGACT GGTAGAGAGG GTATGGCTTA TAATCCAATG GAAAGTAGAT GGGACCAGGT TGAACAAGAA ATGGGTCTGA ATTGGTTTTG CTGTTCTGCG GTAGAGAATG TTTTGTACTC TTATTATAGG GGAGAGTTTA AATGGTATGA CAATAAGGTA CAATGCTGGC GAAGTTTGAA AGGTTTGGAA GGACTGCCTA AATTTGTTAC TTATAGTCGT GTTAAACTGG CAGATTATGG TGGAAATATG GCAGTTTTGT GGGACAAGTA TGCACCTGCA AGTGGGTATA TGGATAAGAT GATTTGGTGT GCAGAGATTT CGCTTGAAAG GCGAAACAGT GAAGAGATTT GGGGGAAGGT CAAGTGGTTT GATGCTGTGC TTAAAGTCCC CAAGTCTTAT GAATTTGTGC ATGATCTTGC TGCTACTGTT TGATGAATGA CTCGTGAGAC GTGCT 
Length1015
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3449459.. 3450992
Download Sequence
A.thaliana
AGI-codeAT5G48990.1
DescriptionGalactose oxidase/kelch repeat superfamily protein
TAIR curator summaryencodes an F-box protein that interacts with SKP1 and likely to be involved in ubiquitin-mediated protein degradation.
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg906046
6.55744 Ahg952309 Tetratricopeptide repeat (TPR)-like superfamily protein
8.12404 Ahg952414
11.1803 Ahg349378 Protein of unknown function (DUF581)
12.6491 Ahg897522 Cullin family protein
13.1149 Ahg930710
16.2481 Ahg912296 Paired amphipathic helix (PAH2) superfamily protein
16.4317 Ahg919014
16.6132 Ahg917469 glutamine synthetase 1.3
19.7484 Ahg492222 vacuolar ATP synthase G3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression