Detail



ID : Ahg948883

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948883|scaffold_800770.1
Sequence
GATACATCTT AAGTTTCAAT ATGTCTTTCA ATCTAAATAG GTTCAATATT TACGGTGATG ATTTCATAAA CCATCGCATG AACCATGAAG ATTTGTTTGA TTCTCCTCCA TCCTTTTCTT CTTATCAAAA TTCACATGCC TCTTCATTTT CTTTTCAAAT TAACAATTCA CATATGAACT ATCATATGAT GAGGAGAAAC TTTGATTCTT TTTCTGGTGC CAAATATTTG TCTATTCAAA ATAATTCTCA TATTACTCAA ATTTCTTTTA CTGAAACCAT CACAAATAGG TATACTACTA TTGTTCCTAC CAATACACTT GATAATTTCC AACATGAAAT TAAACGTGTC AAACGTTCCA TGGATTCTAA TACTAATATT TGGAATCCTG TATCTTATCC TCAAATTTTT TTCGATAATC AGTGCGAAAT TTTGAATCCT ACACCTCTTA GTGTCATTTA TCCGCGCCAA CATTCTGCTG CTCTTCATCA TTCAGATTTT TCTTCCTTTA CATCAAAGTG TAACCATGTT CCTCACGCTA GTCGATCTTC GAAGAAAATT TCCAAACCAA CAAATCTTTT TGAAAGAACT ACTTATTATG TTCATTCTGA AGAAGATGAG AAAAGTGATG ATAATCAATA TGATGGACGT ACACATAGTA TACCATATGT GAAATATGGT CCATATACGT GTCCCAAGTG CAATGGTGTG TTTGACACTT CTCAAAGATT TGCTGCACAT ATGTTATCTC ACTACAACAG TGAGACGAAC AAAGAAAAAG CTTTGAGATT TCGTGCAAGA AATAAAAGAA AATTTCGTAA GCTCATGGCC GGTCAGAAAA TATCAAAACA GAGGATGTAA TTTGTAGTAA TGGAATAAGT A 
Length881
Protein Sequence
Protein Residue
Map Locationscaffold_8: 4405967.. 4406844
Download Sequence
A.thaliana
AGI-codeAT5G42640.1
DescriptionC2H2 and C2HC zinc fingers superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.83095 Ahg889070
7.81025 Ahg936005
11.4018 Ahg475935 RING/U-box superfamily protein
16.1245 Ahg948446
18.8944 Ahg921296
22.9783 Virus1449
24.8998 Ahg925637
32.8634 Ahg497061 Protein of unknown function (DUF784)
33.4664 Ahg319082 SCR-like 13
34.8999 Virus1395
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression