Detail



ID : Ahg949043

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949043|scaffold_800930.1
Sequence
TACTAATCCC AAAACAGTAT CCATGGATTA CCAAACCTCA CTAATCCTAG CCACCAGCAC AAGCTCCATC TTCCTCTTGC TAATCTTCTT CACCGTCGTT ATGTTGGTAT GTCGCCGTCG TCCTCCAATC GAAAACCATC CTCGCCGGAA TCTTAACTTC CCCGATCCCG ATCTAAACAC GGAAACCGTA ACCGAAAGCT TTGATCCATC AATCTGTGAA ATATCCATGG CGGAACTCAC TATAGCAACC AAAAACTTCT CATCTGATCT AATCGTCGGC GACGGAAGTT TCGGTCTCGT TTATAAAGCT CAGCTCTCAA ACGGCGTCGT AGTCGCCGTT AAAAAGCTCG ATCACGACGC TTTACAAGGA TTCCGTGAAT TCGCAGCTGA AATGGACACT CTAGGTCGTC TCAAACACCC AAACATAGTT CGGATTCTCG GTTATTGTAT CTCCGGATTG GATCGGATTC TGATTTACGA GTTCTTAGAG AAAAGTAGCC TCGATTATTG GTTACACGAG ACTGATGATG AGAACAGTCC ATTGACTTGG CCAACGCGCG TGAATATCAC GCGCGATGTG GCCAAGGGTT TAGCTTATCT TCATGGACTA CCGAAGCCGA TTATTCATAG AGATATTAAA TCGAGTAATG TGTTGTTGGA TTCGGATTTT GTTGCACATA TAGCGGATTT CGGGTTGGCG CGTAGAATGG ATGAGTCGAG GACTCATGTG TCGACGCAAA TGGCAGGGAC GATGGGGTAC ATGCCCCCGG AGTATTGGGA AGGGAATACC GCGGCGACGG TTAAAGCTGA TGTTTATAGT TTTGGTGTTT TGATGTTGGA ATTGGCGACG CGGAAACGGC CGAATTTAAC GGTTTTTGTG GATGAGACGG AGGTTGGGTT GGCTCAATGG GCTGTGATCA TGATGGAGCA AAATCGGTAT TATGAAATGT TAGATTTCGG AGGTGTTGGT GGTAGTGAGA AAGGTGTGGA AGAGTATTTT AGGATTGCTT GTCTTTGTAT TAAAGAGTCG ACTAGAGAAA GGCCTACTAT GAATCAAGTG GTGGAGTTGT TGGAAGAATT ATGTCGACTT ATGTAGTCTT ACTCCATAGG TAGATG 
Length1116
Protein Sequence
Protein Residue
Map Locationscaffold_8: 6055642.. 6056757
Download Sequence
A.thaliana
AGI-codeAT5G42440.1
DescriptionProtein kinase superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
27.0924 Ahg492857 VACUOLAR SORTING RECEPTOR 7
39.7995 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
50.4975 Ahg887308
50.7543 Ahg486058 Ca-2+ dependent nuclease
56.8331 Ahg913087 PLATZ transcription factor family protein
57.3411 Ahg910885 protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding
61.4003 Ahg471506 Protein of unknown function (DUF1262)
65.3835 Ahg902367 chitinase, putative
78.4857 Ahg942355 carbon/nitrogen insensitive 1
79.4984 Ahg352245
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression