Detail



ID : Ahg949048

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949048|scaffold_800935.1
Sequence
TCTTTGTCTT CTCAAAAGAC ATGGATTGTT CACGGGATCT TAGCCGGAAC AACGATTGCA GCCGCGATTG GCGCAAGTGC GTATCTAGGT TGATCCAAGA AATTCCGGAG CCGGGTCATC GGAATCATTC GCGCACGTTA CGCTTCCTCT CGATTCGAGG GCTAATGGGA GAAACTAAAA GTGAAGTTCA GTTTGTGACA TGTCTCGCGT TGACTGATGA TGCCAAACGC CTAAGTTGAT GAGAAGAAGA ACAAACGTT 
Length259
Protein Sequence
Protein Residue
Map Locationscaffold_8: 6077687.. 6077945
Download Sequence
A.thaliana
AGI-codeAT1G53000.1
DescriptionNucleotide-diphospho-sugar transferases superfamily protein
TAIR curator summaryEncodes a putative CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase.
Alias[AtCKS][CKS][KDSB][CMP-KDO synthetase]
Gene coexpression
MR
MR Locus Description
10 Ahg911955
27.8747 Virus1227
32.249 Ahg897335
44.4297 Ahg319913 Protein of unknown function (DUF626)
48.6415 Ahg952500 DNA repair-recombination protein (RAD50)
61.8708 Ahg923182
65.6354 Ahg470580 Eukaryotic protein of unknown function (DUF842)
78.8036 Ahg951982 RNA-binding (RRM/RBD/RNP motifs) family protein
85.0764 Ahg486635 Pentatricopeptide repeat (PPR) superfamily protein
89.398 Ahg925990 Phosphoglycerate mutase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression