Detail



ID : Ahg949064

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949064|scaffold_800951.1
Sequence
TTCAAACGCG ATAGAGAGTC TCTAATGGTC ATTGTGATGG ACGCAGATGA AGAATCCACA GGAGATGCAG AGAACCTTGA GGAAGAAGTT ACCGCAGAAG AACCGATCCA CGATGAGGCT GTGGATGCGG TGGAGATTCA TGACGAAGAA GTGAAAAATG GTGATGATGA TTGTGATGGA TTGGTGAGCG ATATCGTATC GGTTATCGAG TTTTTGGATC AGATTAACGG TTATCGAAAA ACACAACAGA AAGAATGTTT TAACCTCGTA AGACGATTGA AGATTCTGAT TCCTTTTTTG GAAGAGATTC GAGGATTTGA CTCACCAAGT TGCAGGCATT TTGTAAATCG TTTGAGGAAA GTGATTCTTG TTGCTAAGAA ATTATTAGAA ACTTGCAGCA ATGGCAGCAA AATCTATATG GCATTGGATA GCGAAACAAT GATGACGAGG TTTCATTCGA TTTACGAAAA GTTGAATCGT GTTCTTGTTA AAACTCCTTT TGACGAATTG ACGATTTCTG AAGATGTGAA AGAAGAGATT GATGCATTGT GTAAACAACT GAAAAAGGCA AAAAGAAGAA CAGATACACA AGACATAGAG CTAGCAGTAG ACATGATGGT GGTCTTTTCA AAAACCGATC CTCGAAACGC AGATAGCGCT ATAATCGAGA GGCTTGCGAA AAAGCTTGAG CTACAAACAA TTGAGGATTT GAAGACGGAA ACCATAGCCA TAAAAAGCTT AATCCAAGAA AAAGGAGGGT TGAATATAGA GACTAAACAA CATATCATTG AGCTTCTTAA CAAGTTCAAG AAGCTTCAAG GTCTTGAAGC TACCGACATT CTCTACCAAC CTGTCATCAA TAAAGCATTC ACCAAGTCGA CTTCCCTAAT ATTACCTCAC GAGTTTTTGT GTCCTATCAC TCTCGAAATA ATGCTAGATC CGGTTATCAT CGCCACTGGA CAGACATATG AAAAGGAGAG TATTCAGAAA TGGTTTGATG CGGGGCATAA GACTTGTCCG AAAACTAGAC AAGAGCTAGA TCATCTCTCT CTTGCACCCA ATTATGCCTT AAAGAACTTG ATTATGCAGT GGTGTGAGAA GAACAATTTC AAGATTCCAG AGAAAGAAGC AAGTCCCCAC TCAGAAAATG AGCAGAAAGA TGAGGTATCT TTGCTGGTGG AAGCTTTATC GTCAAGCCAT TTGGAAGAAC AAAGAAGATC AGTGAAGCAG ATGCGTTTGC TCGCACGAGA AAATCCCGAG AACCGAGTTT TAATAGCGAA TGCAGGAGCG ATCCCTCTGT TAGTTCAACT CCTTTCTTAC CCTGATTCTG GAATCCAAGA GAACGCAGTA ACGACTTTGT TGAATCTATC TATCGATGAG GTCAACAAGA AACTCATCTC AAATGAAGGA GCTATTCCAA ACATTATTGA AATCCTTCAA AATGGAAACA GAGAGGCAAG AGAGAACTCT GCTGCAGCTT TGTTTAGTTT ATCGATGCTC GATGAGAACA AAGTAACTAT CGGATTATCA AATGGGATCC CGCCTTTAGT CGATTTACTG CAGCATGGGA CATTAAGAGG GAAGAAAGAT GCTCTCACTG CACTCTTTAA CTTATCCCTT AATTCAGCTA ATAAAGGGAG AGCCATTGAT GCTGGAATCG TTCAACCTTT GCTCAACCTT CTGAAAGATA GAAACTTAGG GATGATCGAT GAAGCGCTTT CGATTCTGTT GCTTCTTGCA TCACACCCTG AAGGACGTCA AGCCATTGGA CAACTCTCCT TCATTGAAAC GCTTGTGGAA TTTATCAGAC AAGGCACCCC GAAGAACAAA GAGTGTGCGA CCTCGGTGCT ACTTGAACTA GGCTCTAACA ACTCATCTTT TATCCTCGCT GCGCTTCAAT TCGGCGTCTA TGAATATCTT GTAGAAATAA CCACATCTGG AACAAACAGA GCTCAAAGAA AAGCAAATGC TCTTATACAA CTCATAAGCA AATCTGAACA AATTTAGACT TGTTCTAAAC TTTTCATCTT GTACTG 
Length2036
Protein Sequence
Protein Residue
Map Locationscaffold_8: 6288919.. 6291244
Download Sequence
A.thaliana
AGI-codeAT5G42340.1
DescriptionPlant U-Box 15
TAIR curator summary
Alias[PUB15][Plant U-Box 15]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg922566
4.47214 Ahg895312 Defensin-like (DEFL) family protein
9 Ahg887631
9 Ahg916558
9 Ahg888472
9 Ahg905482
9 Ahg355953
11.4018 Virus2890
11.8322 Ahg471367 F-box family protein
14.3875 Ahg908810
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression