Detail



ID : Ahg949296

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949296|scaffold_801183.1
Sequence
TTGTTGTTGA TAGATTGTGA ATGGAAAAGG GTGTTATGGA GAATACAGAG ACATCAAAGA TTAAGTCGTT GAGCAATGGA GAGGTTTTAG TGGAAAAACG AGGAGTGTCA GTTTTGGAGA ATGGTGGTGT TTGCAAGCTT GATTGTATGA CGACGGGGCT TAAGTTTAAG CGCCGGAAGG TTTTTGCTGT GAAGGATTTC CCACCGGGTT GTGGGACCGG TGTGGAGCGG TTTGGATCGA GAACAATGGA AGATGAAGAT GAAGAATTTG AAGATGAATA AGTTTTATTA TGAGATATTT T 
Length301
Protein Sequence
Protein Residue
Map Locationscaffold_8: 11418403.. 11418703
Download Sequence
A.thaliana
AGI-codeAT2G22740.2
DescriptionSU(VAR)3-9 homolog 6
TAIR curator summaryEncodes a SU(VAR)3-9 homolog, a methyltransferase involved in histone methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs but has a preference for the latter two. This is a member of a subfamily of SET proteins that shares a conserved SRA domain.
Alias[SDG23][SUVH6][SET DOMAIN PROTEIN 23][SU(VAR)3-9 homolog 6]
Gene coexpression
MR
MR Locus Description
4 Ahg917075
4.24264 Ahg949060
4.89898 Virus1232
6.32456 Ahg907969
6.40312 Ahg933692 Plant invertase/pectin methylesterase inhibitor superfamily protein
7.93725 Ahg348353
8.48528 Ahg497243 PHYTOCYSTATIN 2
8.48528 Ahg482126 PHYTOCYSTATIN 2
9.48683 Ahg944315 Arabidopsis protein of unknown function (DUF241)
13.4164 Ahg948502
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression