Detail



ID : Ahg949342

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949342|scaffold_801229.1
Sequence
AAAAAAAAAA CTCTTTGTCT TTGCAAATGC CGATTCCAAG AAAAGCCTTA ACTGTTTCTC ATTTTTCCAT TACCTTGTCT CTGTTTTTAG CTTTCTTCAT CTCCTCGACC TCTGCATCAA CCAATGAAGT CTCAGCTTTG ATTTCTTGGC TTCAAAGCTC GAACTCGCCG CCGCCGTCAG TCTTCTCCGG CTGGAATCCT TCTGATTCCG ACCCGTGTCA ATGGCCTTAC ATTACTTGTT CCTCCTCAGA CAACAAACTC GTTACAGAGA TCAATGTCGT CTCTGTTCAG TTAGCTTTAC CTTTCCCTCC TAACATTTCT TCTTTTACTT CACTTGAGAA ACTCGTTATC TCCAACACTA ATCTCACCGG AAGTATATCT TCTGAGATTG GAGATTGTTC TGAACTTAGA GTTATTGATT TGAGCTCAAA TAGTCTTGTT GGTGAAATAC CTTCGAGTCT AGGGAAGCTC AAGAATCTTC AAGAACTCAG TTTAAACTCC AATGGCCTCA CAGGAAAGAT CCCACCGGAA CTCGGCGACT GCGTTGCTCT CAAGAACCTT GAGATTTTCG ACAACTACTT ATCCGGGAAT CTACCGTTGG AGCTCGGAAA GATCCCGACT CTTGAGAGCA TAAGAGCCGG AGGAAACTCA GAGCTTTCAG GGAAGATCCC GGAGGAGATC GGAAACTGTG GGAATCTCAA GGTTTTAGGG CTCGCCGCCA CGAAAATATC CGGTTCTTTA CCTGTTTCGT TGGGTAAACT AAGCAAGCTC CAGTCTTTAT CTGTCTATTC TACAATGCTC TCTGGTGAGA TCCCTAAAGA GCTTGGAAAC TGCTCTGAAC TTATCAATCT GTTTCTATAC GACAATGACT TGTCCGGCAC GCTTCCAAAA GAACTAGGAA AGCTTCAAAA CCTAGAGAAG ATGCTTCTAT GGCAGAATAA TCTCCACGGA CTTATCCCTG AGGAGATTGG ATTTATGAAG AGCTTAAACG CCATTGATCT CTCTATGAAC TATTTCTCAG GAACCATCCC TAAATCGTTT GGTAACTTGT CGAATCTACA AGAGCTTATG CTTAGCAGCA ACAACATCAC CGGGTCAATA CCTTCAGTTC TAAGTAACTG TACACGGCTT GTTCAGTTCC AGATTGATGC CAATCAGATT TCAGGTTTGA TTCCGCCAGA GATTGGATTG CTTAAGGAGC TCAACATCTT CTTGGGATGG CAGAATAAGC TAGAAGGGAA TATTCCGGTA GAGTTAGCTG GTTGTCAGAA TCTTCAAGCT CTTGACTTGT CTCAGAATTA TCTCACCGGA GCTTTACCTG CTGGTTTGTT TCATCTTCGT AATCTGACTA AGCTCTTGCT TATATCTAAT GCCATCTCCG GTGTTATCCC ACCGGAGATC GGAAACTGCA CTTCACTTGT CAGATTAAGG CTTGTCAATA ACAGAATCAC CGGAGAAATC CCTAAAGGAA TAGGATTTCT TCAGAACCTT AGCTTCCTCG ACTTGTCTGA GAACAATCTC TCCGGTCCAG TTCCTTTGGA GATAAGCAAC TGCAGACAAC TCCAAATGCT AAACTTGAGC AACAACACTC TTCAAGGTTA TCTTCCTCTG CCTTTATCAT CTTTAACAAA GCTTCAAGTA CTTGATGTCT CTTCAAATGA CTTGACTGGC AAGATTCCTG ATAGTCTTGG TCATCTCATT TTGCTCAATC GGCTCGTTCT TAGTAAGAAT TCCTTTAATG GTGAAATCCC TTCGTCTCTC GGTCACTGCA CGAATCTTCA GCTTCTTGAT CTCAGCAGTA ATAACATCTC TGGAACTATA CCAGAGGAAC TCTTTGACAT TCAAGATCTT GACATTGCCT TAAACTTGAG CTGGAATTCA TTAGATGGCT CTATCCCAGC AAGGATTTCA GCGCTTAACC GATTATCCGT GCTGGATATT TCGCATAACA TGCTTTCAGG CGACCTCTTT GTGCTGTCCG GTCTTGAAAA CTTGGTTTCT CTTAACATCT CTCACAACAG ATTCTCAGGT TATCTTCCAG ATAGTAAGGT GTTTAGACAG CTGATAAGAG CAGAGATGGA AGGAAACAAT GGACTCTGTT CCAAAGGTTT CAGGTCTTGT TTTGTAAGTA ACAGTACACA GTTAAGTACA CAGCGCGGTG TGCATTCACA GAGACTCAAG ATAGCCATTG GATTGCTTAT AAGCGTGACA GCGGTTCTTG CGGTATTAGG CGTGTTGGCC GTTTTAAGAG CTAAACAAAT GATTCGGGAT GGTAACGATT CAGAGACCGG AGAAAATCTA TGGACATGGC AATTCACACC TTTTCAGAAA CTCAACTTCA CAGTGGAACA TGTACTCAAG TGTTTGGTAG AAGGTAATGT TATAGGGAAA GGTTGCTCCG GAATAGTGTA CAAAGCTGAA ATGCCAAACC AAGAAGTCAT CGCAGTGAAA AAACTCTGGC CAGTGACAGT GACATTGCCT AATCTGAATG AGAAAACTAA GTCATCAGGA GTTCGAGACT CATTCTCAGC TGAAGTAAAA ACACTTGGAT CGATCAGACA CAAGAACATT GTACGGTTCT TGGGATGTTG TTGGAACAAG AACACTAGAC TTCTTATGTA CGATTATATG TCAAATGGGA GTTTGGGAAG TTTGCTTCAC GAAAGGAGCG GTGTATGTAG CTTAGGATGG GAAGTGAGGT ACAAGATTAT ACTCGGTGCA GCTCAGGGTT TGGCTTACTT GCACCATGAC TGTGTTCCTC CCATTGTTCA TAGAGACATC AAGGCTAATA ATATTCTGAT TGGCCCTGAT TTTGAACCTT ACATTGGAGA TTTCGGGCTC GCTAAGCTTG TCGACGATGG CGACTTTGCT CGGTCTTCCA ACACCATTGC TGGTTCCTAT GGTTATATAG CTCCAGAATA CGGATACTCA ATGAAGATAA CAGAGAAAAG CGACGTGTAT AGCTATGGAG TCGTAGTGCT CGAGGTACTA ACGGGTAAGC AACCAATCGA TCCAACGATA CCAGACGGAC TCCACATAGT GGACTGGGTC AAGAAAGTCA GAGACATACA AGTAATCGAC CAAACATTAC AAGCGAGACC AGAGTCAGAG GTTGAAGAGA TGATGCAAAC GCTAGGAGTC GCGCTTCTAT GCATTAATCC ATTACCCGAA GACAGGCCTA CAATGAAAGA TGTGGCTGCT ATGCTTAGTG AGATACGTCA AGAAAGAGAG GAATCGATGA AAGTTGATGG TTGCTCGGGA AGTTGTAACA ATGGAAGAGA ACGTCGCAAA GATGATTCGA CGACTTCATC GGTTATGCAA CAAACGGCTA AGTATTTGAG AAGTAGTAGC ACGAGTTTCT CGGCATCTTC TTTGCTTTAC TCTTCTTCTT CTTCTGCTAC TTCTAATGCT AGACCAAATC TTAAATAGAT GGTTAATTAT GTTTCTAAG 
Length3449
Protein Sequence
Protein Residue
Map Locationscaffold_8: 11680449.. 11683364
Download Sequence
A.thaliana
AGI-codeAT5G48940.1
DescriptionLeucine-rich repeat transmembrane protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg475168 Protein kinase superfamily protein
3.74166 Ahg319549 Protein of Unknown Function (DUF239)
14.7309 Ahg479836 Integrase-type DNA-binding superfamily protein
15.7162 Ahg947117
19.1833 Ahg347073
23.4307 Ahg480492 profilin 5
33.0454 Ahg496561 RING/U-box superfamily protein
42.45 Ahg938223
49.4975 Ahg943703
49.679 Ahg949333 C2H2-like zinc finger protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression