Detail



ID : Ahg949379

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949379|scaffold_801266.1
Sequence
TCGAATTGGG CAGAAGAGAG ATGATTGCGG AGAAACCCTC TTGGGTTAAA CATGAAGGGT TACAGATATT CTCCATTGAT GTTCAACCTA ATGGAGAAAG GTTTGCTACA GGCGGTGGTG ACCACAAGTT GGTTCTTCAA CACAATTTGT CCCAATTGGT CCAAAAGATG AAGACACAAG TTCAACATAC CAACAAAGAT TGCATAACAA TAGATCAGCT TAACAAAAAG CGTTCCTATC GTCGAACGAT AGTACGTTTA ACAAAAAAGT GGGAAGCGAG AAATTTAAAA AAAAACAATG AGCTCATAGG AATAAACTTC CTCTTACTTG ATGAAAAAGA AAATACAATT CAAGGCTCTG TACATCATTC TCTTATTGAA AAATTTGGAG CTCACCTATG TGAAGGAAGT CTTATCGAAA TTTGCAACTT TAATGTGCAA GATTGCAATA AGAACTACAA GGTCTCCGAT CATAAATTTC AGATGATACT AACAGAAAGA ACGACAATCG CATCCGTCAA TCAAAATTTA TGCAAAATAT CCCTCGAAAA ATTTCGATTT AGAAATCATG AGGATCTTGC TAAATTGAAA GATATGACAC AACATTTATA CGTGGAATGG AAATCCCAGC AACAATATGG GCAGAACAAG CAGAACAAGT TGTTTTAATT TCTATTTTTA TTTAATAA 
Length688
Protein Sequence
Protein Residue
Map Locationscaffold_8: 11889982.. 11891141
Download Sequence
A.thaliana
AGI-codeAT3G44530.1
Descriptionhomolog of histone chaperone HIRA
TAIR curator summaryEncodes a nuclear localized WD-repeat containing protein involved in negative regulation of knox gene expression via epigenetic mechanism of chromatin re-organization. Interacts physically and genetically with AS1. Expressed in meristem and leaf primordia. Homozygous mutants are embryo lethal. Phenotype of cosuppressed lines is variable but show effects on leaf development similar to as1/as2.
Alias[HIRA][homolog of histone chaperone HIRA]
Gene coexpression
MR
MR Locus Description
9.38083 Ahg950058 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
11.9583 Ahg931486 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
14.2829 Ahg937625 Protein of unknown function (DUF1278)
26.8328 Ahg942564
28.9828 Ahg351860
31.6228 Ahg925854
32.9393 Ahg494746
37.7889 Ahg917622
43.8178 Ahg943951
51.9615 Ahg348399 D-galactoside/L-rhamnose binding SUEL lectin protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression