Detail


ID : Ahg949712

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949712|scaffold_801599.1
Sequence
CTCTATCGCC GCGGCGGAGC CGTTTCCGAT GAGGCTGATA GTACCTCTCC GTGGCGTAAT CCACGGCCGT GGCGGTCTCT TCGTCGGCTC TCTCATTCCT TGTTGTCTCT TCTACTTTCT CCAGCTTTAC CTAAAACGAC GCCGTCCTCC TCCCTCCGAC CCGGCGGAAT TACCGAGAAC GTCGTCACGG ACTAATCTCT TCTCTCGTGG AAACTCGATC GGACGAGTTC GAGTCTCCTC TCGAGCGGTT CCTGTGGCTA AACCTTCCGA TTCGCCTTAT TACATTGGGT TGGAGAGAGT CAAGACGGAT CCGTACGATC GGATTAAGAA CACGGATGGG ATTATTCAGC TTGGATTAGC TGAGAGTACG CTGTGCTTGG ACTTGCTTCA GAGATGGATG TCTGAGAATT TGATGGATTC AATGATGCAA TCTGATGATG GTGAATTTGA TATTAGTAGT ATCGCCATGT ATAAACCTTT TGAAGGATTG CTGGAACTTA GAGTGGCTTT TGCTGATTTC ATGTCACGAA TAATGGGAAG TAATGTGTCA TTTGACCCGT CAAACATGGT TATAACAGCT GGTGGGACTC CTGCTATCGA AGTATTGGCC TTCTGCTTGG CAGATCATGG AAATGCTTTT CTAATTCCTA CGCCATATTA TCCAGGCTTT GACAGGGATA TTAAATTCCG GACAGGAGTG GAGCTTATAC CAGTACACTG CCGTAGCTCT GACAATTTTA CTGTAACGGT TTCCGCACTA GAACAAGCTT TGAATCAGGC TAGAAAACGA GGAAGCAAGG TTTCTGGCAT CCTCTTTTCA AACCCTTCAA ATCCAGTTGG GAACATACTA TCTAGGGAGA CACTCCAAGA TATTTTGAGA TTTGCTCAAG AGAAAAACAT CCATGTTATA TCTGATGAAA TATTTGCGGG TTCTGTTTAC GGGGACAAAG AGTTTGTTAG CATGGCTGAG ATTGCTGGCT CAGGGGAATT TGATAAGAGT AGGGTTCATA TCATCTATGG CTTGTCAAAG GACCTTTCAA TTCCCGGTTT TAGAGCTGGA GTCATCTACT CCTTTCATGA AGACGTAGTA AATGCTGCAA AGAAGCTGAT GAGATTTTCA TCAGTGCCAG TTCCTGTCCA AAGGATACTT ATCTCTCTGC TATCTGATGT TAGATTCATT GAGGAATACA TGAGAGCACA CAGGCAAAGG ATCCGGGATA AGCATATTCG GTTTGTGGAA GGTTTGAAAC AATTAGGAAT TCCATGTGCT GAGAGTGGTG GTGGGTTGTA TTGTTGGGTT GACATGAGCA GTTTACTGAC ATCCTACAGT GAGAAAGGAG AACTCGAATT ATTTGAGAAG CTATTGACTG TTGCTAAGAT TAATGCCACT CCAGGAACAG CCTGTTATTG TATTGAACCG GGTTGGTTCA GGTGCTGTTT TACCGCTTTA GCTGATGAAG ATATCCCAGT GATTATGGAA CGGATCAGAC AGCTTAGGGA ATCATCTAGA TCTTGAGGTC GAACCAGAAT TTAGGT
Length1536
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13796652.. 13798664
Download Sequence
A.thaliana
AGI-codeAT5G51690.1
Description1-amino-cyclopropane-1-carboxylate synthase 12
TAIR curator summaryEncodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.
Alias[ACS12][1-amino-cyclopropane-1-carboxylate synthase 12]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg313993 LOB domain-containing protein 4
9.94987 Ahg489600 Tetratricopeptide repeat (TPR)-like superfamily protein
12.1244 Ahg945837
23.9583 Ahg940824
24.7992 Ahg491314
26.1725 Ahg944602 ADR1-like 1
26.8328 Ahg909112 Pentatricopeptide repeat (PPR) superfamily protein
29.1033 Ahg925208 binding
32.249 Ahg347295 Tetratricopeptide repeat (TPR)-like superfamily protein
41.497 Ahg950248
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression