Detail



ID : Ahg949876

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949876|scaffold_801763.1
Sequence
TAAGTCTGTA CTCGACGATG ATGATGATCA CCCAGAAGCA GAACCAGCAA ACGGTTATTG GATTATCAAA TCTGCTGAAG ACTAACCTGA AAGTGGGCAT AGATGATGAT GATGATGAGA TTCTACATCG TAGGCAAACA TTTGGGTCAA ACACATACCC CTGCAAGAAG GGAAAGAGTT TGTCGCGCTT TATCTGGAAA GCTAGCCAGT TTCCTCCTTC TCTGCTTATC ACGCTTGCTG CTGTGATTCA ATCGCTCCTG CGAATCAGAA GAAAAGTGAC TAGAGGTGGA GGAAGCGTCT GGGTTTCTAT TTATGATATT GTTGTGGGCG ATATTGTACC CCTGAGGAAT GGTGGTCAGG TTCAAAAAGA TCTTCAAATT GATCCATTCC TATTATCTGG TTCAAAACTG ATAGAGGGCA TTGGTACAAT GCTGGTTACA AGTGTTGGAA TGAATACTGA ATGGGGGCAG ATGATGGAGA TTGCACATGA TACTGATGAG GAAAAACCCT TTCAGGTATA CTTGAAATGG ATTGCAAATT CTGCCAGCTG CTTAGTCGTT TTGTTTGCTT TAGTTGCCTG TATCGTTCAA TTATGCCGAT ACTTTTATGG TCGGACCAAA ACATCAGATG GAAATCCAAT GTTTATCCTT GGAATTACCA CTGCCAAAGA AGCAACAGAA TTTGTGATTA AATCCCTGAG TTTTGGGATC GCAACAATAA TAGTGGGAGT GCCTGTTGGA CTTCCTATAG CTGTTCTCTT GAAGCAAGTG CTTTCTTTTA TATGCAATCA GCTCTTTCCT GCTTCTCTTG ATCTTCCTGA GTACCAATTT AAGCATTTAT TTTCTGCTAA GCAGATGTCG GTGGTTGATG TCTGGGCTGG AGAAATAAGA ATGCAAGATA TGGATAATGG TTCACAGTTG CCCACCTTAC TTAAAGAACT AATCATAGAA GGCATTGCCC AAAACACAAA TGGCAGTGTT GTTCTTGAAA CGGGAGTTTC ACCAACAGAA CAAGCCATTC TTAGCTTTGG GAATAAGTTG GGAATGAAAT TTGACGATGT TAGGTCGGCA TCATTAGGCC GTCATACTAT ACCATTCAAC CCAGACAAGA AATATGGAGG TGTGGCATTA AAGCTTAGTA CACGAGCCCT CGTTCATTGG AAAGGATCTG CAAAGATTAT TCTGAATTCA TGCGAAAAGT ATATGGATGG GTCCGACAAC TCCAGAGCTA TTGATGAACA GAAACGAAAG GGTTTTGAAG AAACAATTAA ATACATGTGT GAGAGAGGAT TGCGTTGTGC TGCACTTGCT TATCAACCCT ATGAACTGGA AAAACTTCCA TCCAATGAGG CACTTTCTCG ACTACCTAGT CTACCTGGAA AACTTGTTTT GTTGGCTATT ATTGGTATAG AGGATCCTTG CCGGCCAGGC ACAAAGGAAG AGATCCAACT GTGCCAATCC GGAGGTGTTA AGGTTCGCAT GGTGACGGAC GATGACATTT TGACTGCAAC AGCTATAGCA AAGAAATGTG GGATATTTGA CGAGGCATCT GACGGTAATA TATTGACAGG AGCTGAATTT CGTAATCTTT CCGATCTAGA AAGAGAGGAG CGCGTCGAAG ATCTCTTAGT TCTTGCTGAA TCTTCTCCCA GCGAAAACCT TCTGTTTGTC AAAGCACTGA AGAAAAGACA ACATGTCGTT GCAGCCACTG GGATGGGAAT ACATGATTCA GAGACACTAA TGGCGGCGGA TGTAGGCCTT GCAATGGGAA TTGGAGGAAC TGCAGCGGCA AAAGAGAAGT CCGATATCAT AATATTGGAT GGCGAATTTG CTACGATCAT CAAGGAAGAT ACTAAAAGCT TGTTTTGGAT AATGCAGGTT ATCCTATGGT GTCGATATCT ATACACTAAT ATCCAGAGAT GTGTCCTATT TCGGCTCACT GTCAGTGTAT CCGTTGTGGC TATCTGTGTG GCTGAGGTTG TAATTCATAA TGCATTTCCA TTGAATACCG TGCAGCTCCT GTTACTTAAT CTTACTATCG ACATCTTTGG AGCATTAGCG TTGGCATATA GACCACCAGC TCACCATCTA ATGGGAAAGC CACCGGTTAA TATAAGAGAC CCTCTTATAA ATACAACGAT GTGGAACAAG TTGGTGATAC AGGTGATTCA CCAAGTGCTG TCGCTGGCGC TCGTGCATTC TGAGAAGATA CTGGAGCTGA AGCATGGTCC TACCGGTAAT GCCGTAAAAG TGATGAACAC GTTGATTTTC AATTCATTTG TCTTCTGCAT GGCTTTTAAT AATGACTTTG AGATCCGAAG TCTAGACCAA ACCTTCAAAG AAATTTTTAG AGAGAATATG TTTCTCGTTA CTATAACCTC AACTATTATA TTTCAGATAT TCGTATTAAA GTTACTGGGA CTTTTCAATT CATCCGTTAA GCTTGATTTG AAAGAATGGC TGGTGGCTAG TGTTCTGGGA TTACTCAGCC AATTGGCCAC TCACTTCCCT TTGCAAGCCC ATCAGTATAA CCGTAACTGA GCTTTGTCTT ACTGAATTCC 
Length2560
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14508020.. 14515549
Download Sequence
A.thaliana
AGI-codeAT5G53010.1
Descriptioncalcium-transporting ATPase, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.24621 Ahg923881
10.9545 Ahg478387
13.6748 Virus0092
15.0997 Virus3098
21.9089 Ahg922186
22.2486 Virus3291
25.7682 Ahg923933 ROTUNDIFOLIA like 9
26.5141 Ahg951710 Transducin/WD40 repeat-like superfamily protein
29.8496 Ahg952450
32.9393 Ahg936288 ATP binding microtubule motor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression