Detail



ID : Ahg949877

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949877|scaffold_801764.1
Sequence
TCTACACCCC CGCGACTAAT ATGTTGCAGG TTCCTATCTT CCGAAAAATC TTTAGGCTCA ATCGCGGCAA AGGCTCTGCC CATGCAGCTG GGGATGCGTC AGGCGATTCT GAAGCTGCAG TTGAGAATGC GCCACCCGAT GTGGAGGCAG GTCGTGTTTT CGTCAGTACT GATCGTCGGA GATCGTTGAA GGGTACCTTG AGGAAAGTAT ACCGTCTAAT TAAAAGCACG TGGAAGAGTA ACAGAGCACA TGCCGAATCA GCATCTGTAC ATGCCCACCC ACAAGCAGAA GAACAACAAA CCGAAATTTC AATCGGAGTA ACTACAGCCT CAACTTCTGG CGGGTTTGAG TTTGGATCGA ACAATCTCGC TCAACTACTC AAAGATCGTA CCCTTGAAGC TTTGAATCGA TGTAAAGGGG TTCCAGGATT AGCAACTCTG TTGAAGACTG ACCTGGGAAA GGGAATCGAT GGGCACGACG ATGATCTACT GCACCGTAGG CAGATATTTG GGTCAAACAC ATATCCCTGC AAAAAGGGAA AGCGTTTCTG GCGCTTTATC TGGAAAGCTT GCCAGTTTCC TCCTTCTCTG CTTATCACGC TTGCTGCTGT GATTCAATCG CTTCTGAGAA TCAAAAGAAA GGTGACTAGA GGTGGAGGAA GCGTCTGGGT TTCTGTTTAT GATATTGTTG TGGGCGATAT TGTACCCCTC AAGAATGGTG GTCAGGTTCA AAAAGATCTT CAAATGGATC CATTCCTATT ATCTGGTTCG AAGCTGATAG AAGGCATAGG TACAATGCTG GTTACAAGTG TTGGAAAGAA TACCCAATGG GGGAAGATGA TGGAGACTGC ACATGAGACT GATGAAGAAA TGCCCTTTCA GGTATACTTG AAATGGATTA CAAATTCTGC CAGCTGCTTA GCCGTTTTGT TTGCTTTAGT TGCCTGTATT GTTCAGTTAT GCCGATACTT TTATGGTCAG ACCAAGAAAA AAGATGGAAA TCCGATGTTT ATCCTCGGAA TTACCACTGC CAATGAAGCA ACAGAATTTG TGCTCAAATC CCTGAGTTTT GGGATCGCGA CAATAATAGT GGGAGTGGCT GTTGGACTTT CTATAGCCGT GCTCTTGAAC CTTGCAATTA CAGCGAGAAA AATGCTGACA GACAACGCTT TGATGTCGGT GGTTGATGTC CGGGCTGGAG AAATAAGAAT GCAGGATATG GATGGTGGTT CACAGTTGCC CACATTACTG AATGAACTAA TCATAGAAGG CATTGCCCAA AACACAAATG GCAGTGTTGT TCTTGAAACG GGAGTCTCAG GAAGAGAACA AGCCATGCTT AGCTTCGCTG GGAATAAGTT GGGAATGAAA TTTGACGATG TTAGGTCGGC ATCATTAGTC CGTCATACTA TACCATTCAA CCCAGACAAG AAATATGGAG GCGTGGCATT AGAGCTTAGT ACACGAGCCC ACCTTCATTG GAAAGGATCT GCAAATATTA TTCTGAATTC ATGCGAAAAG TATATAGATG GGTCCGACAA CCCCATAGCT ATTGATGAAT TGAAACGAAA GGATTTTGAA GAAACAATTA AAAACATGTG TATGAGAGGA TTGCGTTGTG CTGCACTTGC TTATCGACCC TATGAACTGG AAAAGCTTCC AACCATTGAG GAGCTTTCTA CACTATCTAG TCTACCTGGA AACCTTGTTT TGTTGGCTAT TATTGGTATA GAGGATCCTT GCCGCCAAGG CACAAAGGAA GCAATCCAAC TGTGCAAATC CATAGATGTT AAGGTTTGCA TGGTGACGGA TGATGACGTT TTGACTGCAA CAGCTATAGC AAAGGAATGT GGCATATTTG ATGAGGCATC TGACGGTAAT ATCACGACAG GAGCTGAATT TCGTAATCTT TCCAGTCTAG AAAGAACGCA GCGCGCCGAA TACCTCTTAG TTCTTGCTCA ATCTTCTCCC AGAGACAACC TTCTGTTTGT CAAAGCACTG AAGGAAAGAG GACACGTAGT TGCAGCCACT GGGATGGGAA TACATGATTC AGAGACACTA ATGGCGGCGG ATGTAAGCCT TGCAATGGGA ATTCGAGGAA CCGCAGCAGC AAAAGAAAAG TCAGATATTA TTGTATTGGA TGACAAATTT GCTACGATCG TCGAGGTTAT ACGATGGTGT CGATATCTAT ACACAAATAT CCAGAAGCAT GTCCTATTTC GGCTCACTGT CAGTGTATCA GTCGTTGCTA TCTGTGTTGT TGAGGTTGTA TTTTATGATG CATTTCCACT CAATACCGTT CAGCTTCTGT TGCTTAATCT TATCATCGAC ATCTTTGGAG CATTATCGTT GGTATACAGA CCACCAGCAA ACCATCTAAT GGCAAAACCA CCGGTTGGTA TAAGAGACCC TCTTATAAAT AAGACGATGT GGTCCAAGTT GGTGCTACAG GTGATTTACG TATTGCTGTT TCTGGCGGTC ATAAATTCTG AGAAGATACT GAAGCTGATG CATGGTCATA ATACCAGTAA TGCCGAAAAA GTGAAGAACA CATTTATATT CAATTGCTTT ATTTTCTGCC TGGCTTTTGG TGAGTTCGAA ATTGGAAGTC TAGACCGAAC CTTGAAAGAA ATCCTTAGAG ATAATATGTT TGTTATTACA ATAGCCTCGA CTATTGTATT TCAGGCAAGT CCTCTGTATA AGTTCACACA ACATTTATTT TCTTTTTCTC TTCTTACATA TCCTTACACC ATAATATATA CTTTCTTTTT GTTCCTTTTA TATCAGATCA TCTTTATAGA GTACATGATC GTCTTCATCT CTCCCGTTAA GCTTGACTGG TAACAGTGGC TGTTGTCCAT TTTTT 
Length2865
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14517889.. 14525201
Download Sequence
A.thaliana
AGI-codeAT5G53010.1
Descriptioncalcium-transporting ATPase, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg951729
6.7082 Virus1739
31.7175 Ahg905424
35.2136 Ahg915140
45.4973 Ahg952502 Exostosin family protein
46.0977 Ahg943191
47.3286 Ahg923609
48.2701 Ahg925381 SCR-like 2
51.7107 Ahg492880 Toll-Interleukin-Resistance (TIR) domain family protein
55.0364 Ahg903298 RALF-like 21
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression