Detail



ID : Ahg949926

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949926|scaffold_801813.1
Sequence
CTTCTTCTTC TTCTTCGAAA TCCGCCATGG CCGCGGCTTT AAGGTCGAAT ACGTCAAGAG AAACCGCTTC TCTCACACTT TCTCAGTTTA GATACTTCTT CTTCAACCGT ATCCACACCG CTCGAACCGC CACGAGTCCT CAGTGTAATC ACCGTTCTAA ATCCCCCAAT AAAATTTCCT CGCTTGGAAC GAGTTTCTTG GATAATCGAG GAGGAGAGAG ACGTAATTCG ACTAAGTGTT ATGCTTCACA GAAGCTGAAC GGTGTTGGTT CTTCTGTTGT TATGCTGAGC TCACAAGGAG ACCCACCGGA TCTATGGCAG CCTCCGGGTG ATGGAGTTTC TGTTAGGGTT AATGGGTCCA GTGTTAATCT GGGTCGTGGA GGTGGTGGTG GTGGAAGTAG TCCTGGTGGT CCTGGTAACG GAACTGGGTC GAATTCGAAA GAAGATTGTT GGGGTGGATC TAATCTTGGG TCTGATTTTC CGACACCAAA GGAGATATGT AAAGGTTTGA ACAAGTTCGT GATTGGTCAA GAGAGAGCCA AAAAGGTACT TTCAGTGGCA GTTTACAATC ACTACAAGAG GATACATCAC GAATCATCAC AGAAACGGTC TGCGGGAGAA ACCGATAGCA CTGCAGTGAA ACCAGCAGAT GATGATATGG TAGAACTAGA GAAGAGTAAC ATTCTCCTGA TGGGACCAAC TGGGTCAGGG AAGACACTAC TTGCGAAAAC CTTGGCACGG TTTGTGAATG TTCCTTTTGT CATTGCGGAT GCAACCACAC TGACTCAGGC TGGTTATGTG GGAGAGGACG TCGAGTCTAT ATTATACAAA CTTCTCACAG TTGCAGATTA TAATGTTGCA GCTGCACAGC AGGGGATTGT TTACATTGAT GAAGTCGACA AGATAACAAA GAAGGCAGAA AGCCTTAACA TCAGCAGAGA TGTATCAGGA GAAGGTGTTC AACAAGCATT GCTAAAAATG CTGGAAGGAA CAATTGTAAA TGTACCTGAA AAGGGCGCTA GGAAACACCC TAGAGGTGAC AATATCCAGA TAGACACAAA GGACATACTC TTTATATGTG GTGGTGCTTT TGTAGACATT GAAAAGACTA TCTCAGAGAG GCGCCATGAT TCTTCAATAG GGTTTGGTGC TCCTGTACGT GCTAACATGA GGGCTGGTGG TGTTACAAAC GCCGCTGTTG CATCAAACCT AATGGAAACT GTGGAAAGCA GTGACCTGAT TGCTTATGGT TTAATACCTG AATTTGTTGG AAGATTTCCA GTTCTCGTCA GTTTGTCTGC TTTGACTGAG AACCAACTTA TGCAGGTGTT GACAGAACCC AAGAACGCTC TTGGAAAGCA ATACAAAAAG ATGTACCAGA TGAATAGTGT AAAGCTGCAT TTCACGGAAA GCGCACTGCG GCTTATAGCT AGAAAAGCAA TAACGAAAAA CACGGGTGCT CGTGGCTTAA GAGCTCTTCT AGAAAGCATC CTCATGGACT CTATGTACGA GATTCCGGAC GAGAGTACAG GCAGCGACAT GATAGAGGCG GTTGTGGTGG ATGAAGAAGC AGTTGAAGGA GAAGGGCGTA GAGGCTCTGG AGCTAAGATT CTCCGTGGTA AAGGAGCATT GGGTCGGTAT CTCTCCGAAA CCAAATCCAA GGATTCCCCA CAGACGACAA AGGACGGATC AGATGGAGAA ACGGAGGTGG AGGCGGAGAT TCCATCTGTT GTAGCAAGTA TGTAATAATG ATCACCATCA TCATC 
Length1765
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14728712.. 14732209
Download Sequence
A.thaliana
AGI-codeAT5G53350.1
DescriptionCLP protease regulatory subunit X
TAIR curator summaryCLP protease regulatory subunit CLPX mRNA, nuclear gene
Alias[CLPX][CLP protease regulatory subunit X]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg946655 Papain family cysteine protease
8.544 Ahg475500 gamma-tocopherol methyltransferase
8.66025 Ahg489182 DNAJ heat shock N-terminal domain-containing protein
10.198 Ahg919779 branched-chain amino acid transaminase 2
15.0997 Ahg313123 UDP-glucosyl transferase 85A3
16.4317 Ahg492144 DEK domain-containing chromatin associated protein
17.7764 Ahg943129 Copper amine oxidase family protein
20.7846 Ahg944866 Protein kinase superfamily protein
21.4476 Ahg934191 Phosphotyrosine protein phosphatases superfamily protein
21.7486 Ahg487925 transducin family protein / WD-40 repeat family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression