Detail



ID : Ahg950090

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950090|scaffold_801977.1
Sequence
CGAGAGATTC AAAAGGTTTA ATGGGAATCG TTGCTTCCAA GGGAGATAGT AACACTCCAT TGTTGAATCT GTGTAAGGAG AGGAAAGAAT TGATCAGAGC AGCTAGAGAT GGTCGTTATC ACTTAGCGAG ATCTCATCTT CTTTACTTTA AATCTCTTTT AGATTTTAGC AAAGCTCTTA ATCAGTTTGT TCATAAGGAT TTGGTTGTGA TTCCGTATTC GGATGATGAT TCGTCTAGTA GTGATATAAT TTGTTCTGGA TCAGATTCAG ACTCGGATAC GGATTCTGAT TCGGGTTCAG ATTCTGATTG TTTAGTCTGT GATCAATCTC AAACAGCTCC GTTGAGCAAC AATGAGGATC AGAATCCTCG AAACCCTGAG TTTGGAGATG GAACTTGCGG TTCAAGTAAC AATGGTCAAG AGGGTATGGA GAAGTCAAGA GAAGATTTAG GGTTTGAGTG GAAACAGTTC GTTAGTGATC CAAGTGAAGA AGAGGTGAAA GGTTCGCAAA ACGTTTCTTC TGTTGAACAG AAGACTTTCG CGAATGGTGA TATACTCGGT TTGTACGGTC CCGTGTATAA CACGCAGCAG TGCGAATTTA TCAAACCTGA TCAAAGAGAT GATGAGGTTG AGAGTGATGG ATTTAGAGAA GTTAGGGAGA GAGAAGGGAT TCCTGATTTG GAACCTGAAA GTGATCATAA TAGTCTTATA AGAAAGAACC AAAAGAAGAC AAAGAAGAAG AAGAAGGTTG CAAGTGAAAT TGATAAGCAA GATGTTGAAG CAAACACTTG TAATGGAGAT GTTGCAGATG AGACTGATAA TTCTAGTGGA GCTTGCGAGC GAGAGACAGC AAAAACTCCA GAGATTGTTA CTGAAGAAGT GACAAGATCA GATGAGGAAG TTGAAGAAGA GACAAGATCA GATGAGGAAG TTTCTGATGA AGCGTATGAG TCTTCTTCTT CTTGTTTTTC GGAATCTTCT GGTTCGGGTT TGACTGATCT AAGGAATGTT GTAGAAAGGA TCACTCGTAT ATGCGAGAAA GCTGTGGGTG ATAGTGAAGT CTCTGAGTTG CTTGAAGTAA GCAGAGTTGT TCATCATCAA CCTTTAGGAT CTCAATTCAA GGGATTTGCT TCAAGGGTAC TTGGTGGTAC CGGGAATTCG ACTCGTGATT TGATTTTAAA GCGCCGTTTT CGCTTAGATG ATGTTGCTGT TTCACTCTCT ATGACATTAG AGAAGCTTTA TATGTGGGAA AAGAAGCTTC ACGCAGAAGT TACAGTAGAA GAAAAGCTTA GGGTTTCTTA TGATAAAGCG TACAAGATTC TGAACAATCT TGATCAAACC GGAGCAGAAT CGAGCGAGAT TTACGAGGCG GAAACTGTGG TTAAACTCTA TTTATCTAAG ATTAATGTTT CGGTTCGAGC GGTTGAATCG ATTTCCATGA GAATTCATAA GATAAGAGAC GAAGAGCTTT CGTTTCAGGT GATTGAGATC ATAAACGGAT TCAAAAGAAT GTGGAGATTC TTGGCGAAAT GTCACCATAA GCAGTTTCGA GTGATTGCGA GAAGCAAGTC TTGTGTTCAC ATTGTTGAAA ATGGATCGAG CTCGAGGAAA GCTACGCAGC AAGTCGAAAA ACAGATTAGA AGATACAGAG AATCTTTGAA AGGTTACATT GATTCTCAGA GAGGTTTCGT TAAGCTCTTA AACGAATGGC TTAGCCGAAA CATCATGGAG GATGATGAAA CCGAGATCGA GGCTCCTGAG ATATTTAGGG TTTGCAGCGA GTGGTTAAGA GAGATTGAGA ATGTGGATGA GATTAAAGTG TTGAGTGCTG TTGAAGAAAT GAGATTAAGA TTTCGAGGGT TAGGGTTTAA GCAAGTAGAG GAAGAGAAAC AGAGGTTGAG AACAGAGAGA TTGTCTAAGG AGTTAGAGAA GAAGACGAAG GAGTTGGAGG AGATCCGGGG AACGGCGCAT GGTTCTGGTC CGACGGCGAA TATGATGGTG GGACCTGAGT TGTTGTTTTT GAGAGAGAGT GTGACGCAAG AAACAGAAAA GCATGAGAGA ATGATAAGAG AGCTAAACGA CGCCGTATCG ATGAGTATGC AAGAGTGTTT GGTTCCTGTC TTTGAGGCTT TGGAGGATTT TTGTTTTGCT AATTTTAAAG CATATCAGAA CATTAGCATC GTTTCCACAG AAACTCTATT ATTGTGTCAA TCATAGAAAT AATCAAATAA ATATGT 
Length2236
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15538734.. 15540980
Download Sequence
A.thaliana
AGI-codeAT5G54480.1
DescriptionProtein of unknown function (DUF630 and DUF632)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
20.4939 Ahg932827
26.0768 Ahg329610 SCD6 protein-related
27.9643 Ahg910883
30.5614 Ahg925156
31.3688 Ahg894993
35.6651 Ahg912687 RAB GTPase homolog A1I
36.3318 Ahg907594
38.4708 Ahg337391
38.7298 Ahg908150 CTP synthase family protein
42 Ahg916596
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression