Detail



ID : Ahg950369

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950369|scaffold_802256.1
Sequence
ATTTATTTCT CATAAAAAAA ATGGCGAGTT ATAAGTTTCT TTCACAAGTT CATCTTATAC TAATAACAAT ATTAATCATC GTTACTCTTT TAACTCCGAT CACAACCAAC ACATCACCAC AACCATGGAA TATTCTTTCT CGCAACGACT TCACCGGAAA GCTAACCACC GCCTCCTCCT CCGTCGAATC AGCCGCCATA GATTTCGGCC ACGTCACCAA AATCTTCCCT TCCGCCGTCT TAAACCCTTC ATCCGTTGAA GACATCACAG ATCTCATAAA ACTCTCTTAT GACTCTCAAT CTTCTTTTCC TTTAGCCGCT CGTGGTCACG GACACAGCCA CCGTGGTCAA GCCTCGGCTA AAGACGGAGT TGTGGTCAAC ATGCGGTCCA TGGTAAACCG GGATCGAGGC ATCAAGGTGT CTAGGACCGG TTTATACGTT GACGTGGACG CTGCGTGGCT ATGGATTGAG GTGTTGAATA AAACGTTGGA GTTAGGGTTA ACGCCGGTTT CTTGGACGGA TTATTTGTAT TTAACGGTCG GTGGGACGTT ATCTAACGGC GGAATTAGTG GACAAACGTT TCGGTGCGGT CCACAGATCA CTAATGTTCT AGAGATGGAT GTTATTACTG GAAAAGGAGA GATTGCAACT TGTTCCAAAG ACATAAACTC GGATCTTTTC TTCGCCGTGT TAGGAGGTTT GGGTCAATTC GGAATTCTAA CAAGAGCCAG AATTAAACTC GAAGTAGCTC CAAAAAGGGC CAAGTGGTTA AGGTTTCTAT ACATAGATTT CTCCGAATTC ACAAGAGATC AAGAACGATT GATATCGAAA ACGGACGGTG TAGATTTCTT GGAAGGTTCC GTAATGGTGG ACCATGGTCC ACCGGATAAC TGGAGATCCA CGTATTATCC ACCGTCCGAT CACTTGAGGA TTGCCTCAAT GGTCAAACGA CATCGTGTCA TCTACTGCCT TGAAGTCGTC AAGTATTACG ACGAAACTTC TCAATACACA GTCAACGAGG AAATGGAGGA GTTAAGCGAG AGTTTGAACT ATGTAAGAGG GTTTATGTAC GAGAAAGATG TGACGTATAT GGATTTCTTA AACCGGGTTC GAACCGGAGA GCTAAACCTG AAATCCAAAG GCCAATGGGA TGTTCCACAT CCATGGCTTA ATCTCTTCGT ACCCAAATCT CAAATTTCCA AATTTGATGA TGGTGTTTTC AAGGGTATTA TCCTAAGAAA TAACATTACT ACCGGTCCCG TTCTTGTTTA TCCTATGAAT CGCAACAAGT GGAATGATCG AATGTCTGCC GCTATACCTG AGGAAGATGT ATTTTATGCG GTAGGGCTTT TAAGATCTGC GGGTTTTGAC AATTGGGAGG CTTATGATCA AGAAAATATG GAAATATTAA AGTTTTGTGA GGATGGTAAT ATGGGGGTTA TACAATATCT TCCTTATCAT TCATCACAAG AAGGATGGGT TAGACATTTT GGTCCGAGGT GGGATATTTT CGTAAAGAGA AAATATAAAT ATGATCCCAA AATGATATTA TCACCGGGAC AAAATATATT TCAATAAATA AACTATCGAG TTAGAAT 
Length1597
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16747661.. 16750727
Download Sequence
A.thaliana
AGI-codeAT5G56970.1
Descriptioncytokinin oxidase 3
TAIR curator summaryIt encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
Alias[ATCKX3][CKX3][cytokinin oxidase 3]
Gene coexpression
MR
MR Locus Description
39.5474 Ahg475947 endonuclease 2
45.2106 Ahg478816 Pentatricopeptide repeat (PPR) superfamily protein
48.4355 Ahg923601
58.7878 Ahg918350 AINTEGUMENTA-like 7
76.433 Ahg937108
86.0116 Ahg321210 VACUOLAR SORTING RECEPTOR 5
87.4929 Ahg487053 glutathione transferase lambda 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression