Detail



ID : Ahg950730

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950730|scaffold_802617.1
Sequence
GAGAACTAGT ATTTTTGTAT ATGAGTATGA CGAGAAGATA TTCGGCTACT CAATACTCAA ACCCAATGAG CCTCCAAAGT TTATCATCTC TTATTCTCCT CGTCACTCTC TTTTCCTCTC CTGCTTTTGC TCTTAAAAAG TCCTACATAG TGTACTTGGG ATCTCATGCC CATCCTTCTC AAATCTCTTC TGCCCATCTC GATGGTGTTG CTCACTCACA TCGCACTTTC CTCGCCTCTT TCGTTGGAAG CCATGAAAAT GCACAAGAAG CCATCTTTTA CTCATACAAG AGACATATCA ATGGCTTCGC CGCAGTTCTT GACGAAAATG AAGCTGCTGA AATCGCCAAG CATCCTGATG TTGTCTCTGT AATCCCAAAC AAAGGAAGAA AACTTCATAC CACTCATTCA TGGAATTTCA TGCTCCTGGA GAAAAATGGT GTTGTTCACA AGTCCTCTCT ATGGAATAAA GCAGGATATG GAGAGGACAC AATCATCGCT AACTTGGACA CAGGTGTGTG GCCTGAGTCA AAAAGCTTCA GCGATGAAGG GTATGGAGCT GTTCCAGCTA GGTGGAAAGG TAGATGCCAC AAGGATGTTC CTTGCAACAG GAAGCTCATT GGTGCTAGAT ACTTCAACAA AGGTTACTTA GCCTACACAG GTCTTCCCTC TAACGCCTCC TTGGAAACCT GTCGTGACCA CGATGGTCAC GGTAGCCACA CTCTTTCCAC CGCGGCCGGT AACTTTGTTC CCGGAGCCAA TGTGTTTGGC ATCGGGAATG GGACAGCCAG CGGCGGCTCT CCTAAAGCTA GAGTTGCGGC TTACAAGGTG TGCTGGCCGC CTGTGAATGG CGCAGAGTGC TTTGATGCTG ATATTTTGGC AGCTATTGAT GCTGCCATCG ACGACGGTGT GGATGTTCTC TCGGCTTCAG TGGGTGGAGA CGCCGGGGAT TACATGAGCG ATGGCATTGC CATTGGATCA TTCCACGCCG TCAAAAACGG GGTGACGGTT GTGTGCTCAG CTGGAAATTC AGGTCCTAAG GCTGGAACTG TCTCAAACGT AGCACCATGG ATTATTACAG TCGGAGCTAG CTCCATGGAC CGAGAGTTTC AAGCCTTTGT TGAGCTGAAC AACGGCCAAA GCTTCAAGGG AACAAGCCTC TCGAAGCCTT TGCCCGAAGA TAAGATGTAT AGCCTCATCA GTGCTGAAGA AGCTAAAGTT TCCAATGGAA ATGCGACTGA TGCATTGCTA TGCAAGAAAG GTAGCCTAGA CCCGGAGAAG GTGAAGGGGA AGATCGTGGT GTGTCTCAGA GGAGACAACG CACGTGTGGA CAAAGGACAG CAAGCACTCG CTGCTGGAGC TGCGGGAATG ATTCTATGCA ACGACAAGGC GAGTGGAAAC GAAATCATCT CAGACGCTCA TGTTCTTCCT GCTTCTCAAA TCGACTACAA AGAAGGTGAA GTTTTGTTTT CGTACCTAAG TTCCACAAAA GATCCCAAAG GTTACATCAA AGCACCAACC GCTACGCTGA ACACAAAGCC TGCTCCTTTC ATGGCCTCTT TCTCTTCCAG AGGACCTAAC TCCATCACAC CGGGCATCCT CAAACCTGAC ATCACTGCAC CCGGTGTCAA CATCATAGCC GCCTTCACCG AAGCCACAAG CCCTACGGAC TTAGACTCTG ACCATCGAAG AACTCCTTTC AACACCGAAT CAGGAACTTC CATGTCTTGT CCTCACATCT CAGGTGTCGT TGGTCTCTTG AAGACTCTTC ACCCCCAATG GAGTCCTGCC GCTATCCGCT CAGCCATCAT GACCACTTCA AGAACCAGAG ACAACAGACG TAAGCCAATG GTTGATGAAT CATTCAAGAA AGCAAATCCC TTCAGCTACG GCTCAGGTCA TGTCCAACCC AATAAAGCCG CCCATCCTGG TCTTGTCTAT GATCTCACAA TAGGAGACTA CTTGGACTTC CTCTGCGCCG TTGGCTACAA CAACACCGTA GTTCAACTCT TTGCCGAGGA CCCACAGTAC ATGTGCCGCC AAGGAGCCAA TCTTCTCGAC TTCAACTACC CTTCAATCAC TGTCCCAAAC CTCACGGACT CTATCACCGT CACTCGCAAA CTCACAAACG TTGGACCGCC AGCTACCTAC AACGCTCACT TCCGAGAGCC ACTTGGAGTT AGCGTCTCCG TGGAGCCAAA ACAGCTCACG TTCAACAAAA CTGGTGAAGT GAAGATATTT CAGATGACTC TTCGTCCCAA GTCAGCGAAG CCTTCTGGCT ACGTCTTCGG AGAGTTGACG TGGACTGATT CACATCATTA CGTTAGGAGT CCCATCGTCG TCGAACTTTA ATTTCAAGCT AGCCTCATTC AT 
Length2372
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18097480.. 18100864
Download Sequence
A.thaliana
AGI-codeAT5G59810.1
DescriptionSubtilase family protein
TAIR curator summary
Alias[ATSBT5.4][SBT5.4]
Gene coexpression
MR
MR Locus Description
26.8701 Ahg945462
30.6594 Ahg946251 proline-rich family protein
30.7409 Ahg913798 F-box and associated interaction domains-containing protein
34.2053 Ahg897179
36.0555 Ahg330465 myb domain protein 100
36.4143 Ahg891002 pinoresinol reductase 2
41.4488 Ahg337343
44.1928 Ahg481923 Lateral organ boundaries (LOB) domain family protein
45.1664 Ahg921411 Domain of unknown function (DUF220)
46.9042 Ahg926309 Protein of unknown function (DUF1163)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression