Detail



ID : Ahg950763

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950763|scaffold_802650.1
Sequence
TCAAGAGATA ACATCAATTA ATGGCAGTCG CCGATAATTC CTTTTCAATG TCGACCATGT TCAATGCTTT ACCATACTCT AAAGGAATCT CCGGTTTCAT TCCTCCTCCT GGATTCGCCC CACGCGCCTC CGCCACGCCC TTGCACGCAG CTCTGTTCAA CCTAATGACT GACGGCGAAG GTGTGTCTTA CTTTAAAGGC ATGATCTCAA AGTCAGACAA AACAGTGCTT CAGAGGATGG CTTCGTTGCT GACGTCAGAC TCCGATTACT TCATGGCGAT CGTCACAAAC AAGTACGGCT CGAGACGCGT GCAGAAGCTC CTCGGCAAAT CAGATGATGC CGACGCGCTC TTCTGTGCCG CTATCTTGCG CCGCTTCCTC CACATCACGA CCGACAAATA CGCAACCTAC GTGACGATAC GAGCCATGGT CGTTTTCGAC AAGGAGATGA AGAAGGCAAT GTACGAGCAC ATTCTCTACC ATGCTCTCGA CCTAGCGTGT GATCAACACG GCTGCATCGC GCTCAACGAT ATCATAACCG ACTCTGACGA TCCTTACTAC AGAGATCAGC TACTAGACTT GGTCGCATCC AACGCTCTCT GTCTAAGCAA CGATGCTTCA GGGAACTTTG TGGTCCAACA TGTGCTTACA CTGTATGACT TGCGTTGCAC TCACAACATC GCGGTTAATC TTTATGGCCA TTGCATTGAT CTCTCGTTTA AGAAGTATGG AAGCTACATC GTGGAGAAGC TTTTGGAGGC GGAGGAGTCA ATGGTTGTGG TGGTTGTGGA GCTTTTGGAT TGCGATGGAG ACACGTTGAT GAGGCTGGCG AGGAATGAGT TTGGGAATTT CGTGGTGGTC AAGGCACTGA GATTCACCAA GGCGATGTCT AAGATTGATC TGTTTTGGGG TTTGGTGCAG AAGCTCATGC CTTTTCTCCA TCTCTTGCGT AGATCTCACG GAAGCAACAT TGCAAGCATC TTGGACTCAT TTAGGCTTCG TTGCTGACTA TAACAACTGT GTGGTAA 
Length1027
Protein Sequence
Protein Residue
Map Locationscaffold_71: 17002.. 18028
Download Sequence
A.thaliana
AGI-codeAT5G60110.1
Descriptionpumilio 18
TAIR curator summaryEncodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.
Alias[APUM18][PUM18][pumilio 18]
Gene coexpression
MR
MR Locus Description
1 Ahg952436 pumilio 18
54.6626 Ahg477951 GNS1/SUR4 membrane protein family
68.3813 Ahg894667
68.4324 Ahg941587 beta-1,3-glucanase 5
87.0689 Ahg914986
89.7998 Ahg493979 AGAMOUS-like 75
92.6715 Ahg358814 Acyl-CoA N-acyltransferases (NAT) superfamily protein
93.3542 Ahg920109 Integrase-type DNA-binding superfamily protein
95.0526 Ahg943324 RNI-like superfamily protein
95.1893 Ahg914084
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression