Detail



ID : Ahg950774

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950774|scaffold_802661.1
Sequence
TTTCTGTAGA TCAAGAGATA ACATTAATGG CAGTCGCCGA TAATTCCTTT TTAATGTCGA CCATGTTCAA TGCTTCACCA TACCCTAAAG GAATTTCCGG TTACATTCCT CCTCCAGGTT TCGCCCCAGG CGCCTCCGCC ACGCCCTTGC ACACAGCTCT GTTCAACCTA ATGACTGACG GAGAAGCTGT GTCTTACTTT AGGGAGATGA TCTCAAAGTC AGACAAAACA GTGCTTCAGA GGATGGCGTC GTTGCTGACG TCAGACTCCG ATTACTTCAT GGCGATCGTC ACAAACAAGT ACGGCTCGAG ACGCGTGCAA AAGCTCCTCG GGAAATCAGA TGAGGTGGAC GCGTTCTTCT GTGCCGCTAT CTTACGCCGC TTCCTCCACA TCACGACCGA CAAATACGCA TCCTACGTGA CGATACGAGG CATGGTCGTT TTCGACAAGG AGATGAAAAA GCCAATGTAC GAGCACATTC TCTACCACGC TCTCGACATA GCGTGTGACC AACACGGCTG CATCGCACTC AACGATATCA TAACCGACGC TGACGATCCT TACTACAGAG ATCAGCTACT AGACTTGGTC GCATCCAACG CTCTCTGTCT AAGCAACGAT GCTTCAGGGA ACTTTGTGGT CCAACATGTG CTTACACTGT ACGAGTTGCG TTGCATTCAC AACATCGCGG TTAATCTTTT TGGCCATTGC ATTGATCTCT CGTTTAAGAA GTATGGAAGC TACATCGTGG AGAAGCTTTT GGAGGCGGAG GAGTCAATGC TTGTGGTGGT TGTGGAGCTT TTGGATTGCG ATGGAGACAC GTTGATGAGG CTGGCGAGGA ATGAGTTTGG GAATTTCGTG GTGGTCAAGG CACTGAGATT CACCAAGGCG ATGTCTAAGA TTGATCTGTT TTGGGGTTTG GTGCAGAAGC TCATGCCTTT TATCCATCTC TTGCGTAGAT CTCACGGAAG CAACATTGCA AGCATCTTGG ACTCATTTAG GCTTCGTTGC TGACTATGAT AACTGTGTAT TGATGTC 
Length1037
Protein Sequence
Protein Residue
Map Locationscaffold_71: 16993.. 18023
Download Sequence
A.thaliana
AGI-codeAT5G60110.1
Descriptionpumilio 18
TAIR curator summaryEncodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.
Alias[APUM18][PUM18][pumilio 18]
Gene coexpression
MR
MR Locus Description
1 Ahg924684
3.87298 Ahg896790
4.89898 Ahg491082 isocitrate dehydrogenase III
6.32456 Ahg927847
10.7238 Ahg887627
16.9115 Ahg946123 Leucine-rich repeat protein kinase family protein
17.3494 Ahg887827 Nodulin MtN3 family protein
18.1659 Ahg926203 Eukaryotic aspartyl protease family protein
19.6214 Ahg923031 Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related
22.2486 Ahg949132
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression