Detail



ID : Ahg950935

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950935|scaffold_802822.1
Sequence
AAGAATAAAA AAGAAAAAAA ATGGGAAAAA TTTCGTTAGC GGTATGTCTA ACGTTGCTTG TCACATTAAG CACTGTTTAT GAAACACAAG GGACGTTCTC ATTACCCCTT TACTTGAAAA ATTTCCCCAA AGTGGGCAAA GACTATGAGG CTTTCGCAAA CAAAGGTATA TCGGACTTCT TGGGTGAACT GGAGGGTATG TGTCCTAAAA CCGCAGAGTT CAAGGATTTC TTTGAAAAGT TGAAGGATTA CATGGCCTCC TTCAATTCGG CATCACCCGG GTCAAAAGAC AACCTGTTCG AGATGTCAGT AAAATCTGAA AAGCTGTTCA AGGCTATGTC TGCTTTCAAC AGTAGTAACG GCGGAACATC AGAGGATTCG TGGAAGCTGG TGGATGGCTT GTTGTCAATG GGTAAAGGTT TGGTTGAGAT GAAGAAGAGC GGTTCGAAGG AGATAACTTT TGAACAGAGA AGAGATCTGA TCAGTTCTAT GGTGAAATGG GCTAGAGCTA TCGGTCTATT CGTGAAGGCG GCCTCTGAAG ATAAAGGACA ATCTATTGAT CTGGCATCTT TTGGGATCGA CTATGACAAC CATGTAGAAT CCCCTTTTTC AAAAAGAGCT ATGTATGAAA AACAAGGAAC GTTCTCATTA CCCCATTACT TGAAGAATGC CCCCAAAATG GGCAAAGACA TTGAGCCTTT CGCTTACAAT GGTATGTCGG ACTTCTTGGG TAGCCTAGAG AGTAAGTGTC CTGCGACACC AGAGTTCCAG GATTTCTTTG TAAAGCTGGA GGACTACATG GCCTGCTTCA AGTTGGTATC ACCCGAATCA AAAGACGACA TGTCAGTGAA ATCTGAGAAG CTCTTCAGGG CTATGATTTT ATTGGATGGT ACTAAAGGCG GAACATCAGT GGATTCGTGG AGGATGCTTG ATGGTATGTT GTCAATGGGA AAAGTTTTGG TTGAGATGAA GAAGAGCGGT TCCAAGGAGA TAACTTTTGA ACAGAGAAGA GATCTGATCA GTTCTATGGT GAAATGGGCT AGAGCTATCG GTCTATTCGT GAAGACGGCC TCTGGGAATA AAGGAAAACC TATTGATCTA GCACCTTTTG GAATTGATTA TGAAAACAAT GTCGGAAATG GGAAAGGTAA CTATAGAACC GGCCCTGTTC TGATAGACGA CGGCAGCGAG CTCTAAAGGC TCCAAAGTAA AGAAAG 
Length1216
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18934153.. 18935563
Download Sequence
A.thaliana
AGI-codeAT5G61720.1
DescriptionProtein of unknown function (DUF1216)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.74166 Ahg351609 Protein of Unknown Function (DUF239)
5.19615 Ahg484914 transposable element gene
5.2915 Ahg351608 Protein of Unknown Function (DUF239)
11.4018 Ahg316947 Pectin lyase-like superfamily protein
13.8564 Ahg929770 Protein kinase superfamily protein
14.9666 Ahg921700 ENTH/VHS/GAT family protein
15.2971 Ahg494865 Pectin lyase-like superfamily protein
16.9706 Ahg477013 Terpenoid cyclases family protein
18.8944 Ahg338229
19.3391 Ahg321478 Fatty acid hydroxylase superfamily
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression