Detail



ID : Ahg950951

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950951|scaffold_802838.1
Sequence
AGCAAAAGAG TGGATCCTCG AATGTATGGG AAGGGGCCTT TTGGAGGCGA TGAATCTGAG GAAAAAGAAG AAGATGAGAA CCTTTTCCCG GTCTTCTCCG CCCGATCTCA ACACGACATG CGTGTTATGG TCTCGGCCTT GACTCAAGTA ATCGGAAGCA ACTCTCATGA CAACATGAGC TCTATTGATA ATTATCCTTC TGTGTATAAT CCACAAGACC CTAATCAACA AGTTGCTCCT ACTCATCAAG ACCAAGGGAA CTTGAGGAGG AGACACTATA GAGGTGTAAG GCAAAGGCCA TGGGGAAAGT GGGCAGCTGA AATCCGAGAT CCACAAAAGG CGGCACGAGT GTGGCTCGGG ACATTTGAAA CCGCTGAATC CGCAGCCTTA GCTTATGATG AAGCAGCTCT TAAGTTCAAA GGAAGCAAAG CAAAACTCAA TTTTCCCGAG AGGGTTCAGC TTGGAAGTAA CTCTACATAT TACGCCTCCA ACCAAATTCC ACAAATCGAG CCACAAAATA TACCAAACTA TAATCAATAT TTTCAAGATG GGAGTAGTAA TGATATGCTA AGTTTTAATT TGGGCGGTTT ATATGGTAGT GGTAGTGGAT ATTCCATGTC CCATGATCAT AGTACTACGA CTGCTGCTAC AACTTCCTCG TCTTCTGGTG GCTCTTCTAG GCAACATGAA GATCAAGATT ATGCCAAATT TTGGCGCTTT GGGGATTCAT CTTCCTCTCC TCATTCGGGT TTTTGAGATT TGATAAGCTA CTTGTG 
Length776
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19003821.. 19004960
Download Sequence
A.thaliana
AGI-codeAT5G61890.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.
Alias
Gene coexpression
MR
MR Locus Description
4.69042 Ahg483936 Plant invertase/pectin methylesterase inhibitor superfamily
4.89898 Ahg327471 Uncharacterised protein family (UPF0497)
10.583 Ahg890493 Auxin-responsive family protein
21.9089 Ahg487556 Integrase-type DNA-binding superfamily protein
25.04 Ahg492740 MYB-like 102
32.4037 Ahg941940 Protein kinase superfamily protein
43.2204 Ahg934840 laccase 5
44.4297 Ahg472780 FAD-binding Berberine family protein
45.6946 Ahg348149 GDSL-like Lipase/Acylhydrolase superfamily protein
57.3934 Ahg478237 laccase 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression