Detail



ID : Ahg951329

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951329|scaffold_803216.1
Sequence
ATTCATCTCA TCAGATCTCA ATGGACAAAT TAGGCAGACG AAGCGAAGAA GAAAGTTATC TATGTATTCC TCTTCAGTGT CTCGACCAAA CTCTCAAAGC TATCTTGAAA TGCCTTGGTC TTTTTCATCA AGATTCTCCG ACAACGTCGT CTCCGGGAAT TTCAAACCAG CCGGTAATTA AGCTTTCAAG TGTATATTTT GGATTAATAT AGGATTATTA GTTTTTGGTT GTT 
Length233
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20387146.. 20387378
Download Sequence
A.thaliana
AGI-codeAT5G64900.1
Descriptionprecursor of peptide 1
TAIR curator summaryEncodes a putative 92-aa protein that is the precursor of AtPep1, a 23-aa peptide which activates transcription of the defensive gene defensin (PDF1.2) and activates the synthesis of H2O2, both being components of the innate immune response.
Alias[ATPEP1][PEP1][PROPEP1][ARABIDOPSIS THALIANA PEPTIDE 1][PEPTIDE 1][precursor of peptide 1]
Gene coexpression
MR
MR Locus Description
2 Ahg312565
5.47723 Ahg479216 F-box family protein
7.07107 Ahg907253
9.79796 Ahg948387
12.9615 Ahg949031 calcium-dependent protein kinase 21
13.4164 Ahg939730 Mediator complex, subunit Med7
23.6643 Ahg482911 Low temperature and salt responsive protein family
26.3249 Ahg888791
32.8634 Ahg951014 structural maintenance of chromosomes 2
34.4964 Ahg333224 Ribonuclease III family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression