Detail



ID : Ahg951412

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951412|scaffold_803299.1
Sequence
GAAATGACCT TGCGATTCGT ATGGCTCCGG CTGTTTTGGG TACCTTAAAC GAACCGTCGT ACCAGGAACA ATGCGGCGCC GTTTTTATGA GGAAATTTAC AAACCAATCC GTCACCGAAA ACACCAATAA CCTTCCTCTC GTCAACCCTA ACCCTAACCC TAATTTCGAC AGGAGCAATT CGAGCAAACA GTTTGATGAT TCGTCGGAAT TTGGGAGCTA CGCTACTTTT AACATCGCTG GGTACACCTC AAATCAGCTC AGGGAGCTGA AGAAGCGTTT CACCTCTGAG CTCGAGCAGA TTCGGATCCT GAGAGAACGG ATCGAGTCAG GGACGTTCGA GACTCAGCAA GCTTATACTA TCCCGGAGGT ACCCGCCGTT CGATCAGCTC CGTTGAATAG TTTCGCCGGT GAAAAGAATG ACCTTGGACC GAAGAAGAAG AAGCAGAAGA AAAATGTGTC AGGTCTCAAG CGAGGCAATC AATTTGCTGC TTCGGATCCG GAGTCGGAGA AATTATTGGC TGGTATGTTG AATACTTGTG GTCAAATCTT GGTGAAGCTG ATGAAGCATA AATGGGCGTG GGTGTTCAAC ACTCCTGTTG ATGTGGTTGG TTTAGGGCTT CATGATTATC ATCAGGTTGT GAAGAAACCT ATGGATCTGG GTACGGTTAA GTTGAATCTT GATAAAGGGT TTTACGTTTC GCCGATTGAT TTTGCTACTG ATGTCAGATT GACATTCAAC AATGCAATGA CGTATAATCC AAAGGGTCAA GATGTGTATT TTATGGCTGA TAAGCTTTTG GATCATTTCG ATGGAATGTT CAATCCTGCT TTTAAGAAGT TTGAGGCTCA GCAGCTTAAA CTCACTGGTT CTTCATCTCG TCTTGAACCT GAGGTCAAGC AAAGACATTG GAATCAGAAT TCGCCAATGG TGGCAAATCC TAGGAAAGGA ACCGAACAAA TATCTATCGC GAAGAAGCTT GATTCAGTGA AGCCGCCACT ACCTGCATTG CCTCCTCAAT TAGTCGAGCC GTCGCGTGTT CAATCTCCTT CTCCACCACC TCCTCCTCCT CCTCCGGTGG TTGAGCCTCA ACTTCCGCAG CTGGTTATTG AAGTAGAAGC ACCTCCTGAT GTGAGTGACG TGACAAAAGG AAGGAAGGGG AAGTTGCCGA AGCCTAAGGC TAAGGATCCA AATAAGAGGT TGATGACAAT GGAAGAGAAG TCAAAGCTTG GTATGAATCT ACAAGACTTA CCTCCTGAGA AGCTTGGACA GTTGGTTCAG ATTCTCAGGA AGAGAAACGG ACATTTAGCT CAAGATGGTG ACGAAATTGA GCTAGATATA GAAGCTGTCG ACAACGAGAC TCTATGGGAG CTTGATCGTT TTGTGACGAA TTACAAGAAG ATGGCTAGCA AAATCAAGCG CCAAGGGTTT ATCAGGAACG TATCAACTCC ACCTAGGAAC ATGACTTCGG TAGCAGAAAT GGGTAGTGCG GAGAAGAGAA CAAGGAGAGG AGATGCAGGG GAAGAGGATG TAGACATTGG AGAAGACATA CCAATCGAAG ATTACCCATC TGTAGAGATC GAAAGAGATG GTACTGCAGT TGCAGGTAGT GGGTCTAGTT CTTCAGGCAG TTCCAGTTCT AGTGGTGGTA GTTCCTCGTC TAGTGATTCA GGGTCAGGTG GGAGTTCATC AGGTAGTGAT TCTGATGCAG ATAGTGTTCA ATCGCCATTT GTGGAAGCAA AAGAAGCTCA ATGATAGAAT CATTTGGTGA TTTA 
Length1774
Protein Sequence
Protein Residue
Map Locationscaffold_112: 13560.. 15513
Download Sequence
A.thaliana
AGI-codeAT5G65630.1
Descriptionglobal transcription factor group E7
TAIR curator summaryThis gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.
Alias[GTE7][global transcription factor group E7]
Gene coexpression
MR
MR Locus Description
23.8747 Ahg489110 alkaline/neutral invertase
26.1725 Ahg919087 multidrug resistance-associated protein 5
28.1425 Ahg477943 chromatin-remodeling protein 11
36.2215 Ahg488863 staurosporin and temperature sensitive 3-like A
42.107 Ahg933869 centromere/kinetochore protein, putative (ZW10)
46.1519 Ahg479930 GATA transcription factor 1
51.7687 Ahg478454 Clathrin, heavy chain
66.7083 Ahg488259 Proteasome component (PCI) domain protein
72.0694 Ahg939446 transducin family protein / WD-40 repeat family protein
81.1172 Ahg472173 3-ketoacyl-CoA synthase 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression