| Annotation |
|---|
| Description | jgi|Araly1|951457|scaffold_803344.1 |
| Sequence |
ACTATATCCT CGTCGCAACA ATGGATGCTT CGGTGGTGAG ATTTTCCCAA TCGCCGGCAA GAGTGCCGCC GGAATTTGAA CCAGATATGG AGAAGATTAA ACGGAGGCTG CTCAAGTACG GTGTTGATCC CACCCCCAAA ATCCTGAACA ATCTCCGAAA GAAAGAAATT CAAAAACACA ACCGTAGAAC CAAGCGCGAA ACCGAGTCAG AGGCGGAGGT GTATACGGAG GCGCAGAAGC AGTCTATGGA GGAAGAAGCT CGTTTCCAAA CCCTAAGACG GGAATACAAG CAATTCACGA GGTCAATTTC TGGAAAAAGT GGCGGCGATG TTGGTTTGAT GGTGGGGAAT CCATGGGAAG GAATCGAGAG AGTGAAGCTG AAGGAGCTCG TTAGTGGTGT CAGGAGAGAA GAAGTTAGTG GTGGTGAATT GAAGAAAGAG AATCTAAAAG AGCTGAAGAA GATACTTGAG AAGGATCTTC GCTGGGTTCT AGAAGACGAC GTTGATGTGG AAGAGTATGA TATGGACAAA GAATTTGATC CTGCGAGACG GTGGCGTAAC GAAGGAGAAG CAGTCAGAGT TCTCGTTGAC AGATTGAGTG GTAGAGAAAT CACTGAGAAG CATTGGAAGT TTGTGAGGAT GATGAATCAA TCAGGGCTTC AGTTCACTGA AGATCAGATG CTTAAGATTG TTGATCGATT GGGACGTAAA AACAGCTGGA AACAAGCTTC AGCTGTTGTT CATTGGGTGT ATTCTGATAA GAAGCGTAAA CACAATAGGA GCAGATTTGT TTACACCAAG CTTTTGTCCG TTCTTGGGTT TGCGAGGAGG CCTCAGGAAG CTCTTCAGAT ATTCAATCAG ATGCTTGGTG ATCGCCAGTT GTATCCTGAT ATGGCGGCGT ACCACAGTAT TGCTGTAACA CTTGGACAAG CGGGCTTATT GAAGGAGTTG CTTAAAGTAA TCGAGCGTAT GAGGCAGAAA CCGACTAAAC TAATTAAGAA TTTGCGGCAA AAGAACTGGG ATCCTGTGCT TGAACCCGAC TTGGTTGTAT ACAATGCTAT TCTTAACGCT TGTGTTCCAA CACTCCAATG GAAGGCTGTT TCATGGGTAT TTGTAGAGTT AAGAAAAAAT GGTTTGAGGC CTAATGGAGC TACATATGGG CTTGCGATGG AGGTTATGCT GGAGTCAGAG AAGTATGATC GTGTTCACGA TTTTTTTAGG AAGATGAAAA GCAGTGGCGA AGCTCCAAAA GCAATTACAT ACAAGGTTCT TGTCCGAGCT CTTTGGAGAG AAGGCAAAAT CGAGGAAGCT GTTGAAGCAG TCAGAGATAT GGAACAAAAG GGAGTTATAG GAACGGGTTC AGTTTACTAT GAATTGGCAT GCTGTCTGTG CAACAACGGG CGTTGGCGCG ATGCAATGCT TGAAGTGGGG AGGATGAAAA GACTTGAAAA TTGCAGGCCG CTTGAGATTA CCTTCACAGG ACTCATAGCG GCTTCATTGA ACGGTGGTCA TGTTGATGAT TGCATGGCTA TATTCCAATA TATGAAAGAT AAATGCGACC CGAATATAGG AACTGCGAAC ATGATGCTTA GAGTTTACGG AAGGAATGAT ATGTTTTCGG AAGCTAAAGA ATTGTTTGAA GAGATTGTCA GCAGAAAAGA GACTCATCTA GTTCCAAACG AGTATACATA CAACTTCATG CTTGAAGCTT CAGCTAGATC ACTGCAATGG GAATACTTTG AGCATGTTTA TCAGACGATG ATTCTTTCTG GTTACCAAAT GGATCAAACA AAACATGCAT CAATGCTTAT AGAAGCATCC AGAGCCGGGA AGGTAACAAA TCTTCTTATA GTTAAAGTGT TTATGGAAGC AAAAGCTGTT GTCTAATTTT GTTTGTTAAT GCAGTG |
| Length | 1906 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 20887009.. 20889531 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G67570.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | Encodes a pentratricopeptide repeat containing protein that is targeted to the chloroplast. Mutants have pale young leave and reduced accumulation of plastid encoded transcripts suggesting a role for DG1 in regulation of plastid gene expression. |
| Alias | [DG1][EMB1408][EMB246][DELAYED GREENING 1][embryo defective 1408][EMBRYO DEFECTIVE 246] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.58258 |
Ahg355153 | arabinose kinase |
| 6 |
Ahg471825 | RNA helicase 36 |
| 6 |
Ahg935024 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 8.94427 |
Ahg477491 | |
| 11.4891 |
Ahg476319 | histidinol phosphate aminotransferase 1 |
| 13.2665 |
Ahg477535 | RING/FYVE/PHD zinc finger superfamily protein |
| 15.4919 |
Ahg477305 | DEAD/DEAH box helicase, putative |
| 15.5563 |
Ahg478681 | CBS domain-containing protein / transporter associated domain-containing protein |
| 15.748 |
Ahg474950 | |
| 16.9706 |
Ahg942945 | SPA1-related 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|