| Annotation |
|---|
| Description | jgi|Araly1|951498|scaffold_803385.1 |
| Sequence |
GTCCGTTAAA ACTCTTGGTA ATGGAGCATA AACTAGCTAC TGCTGAGAAA AAAGTGCTAG TAGACTTGGT GAAGCTAGTT CAGAAACGTG GTTTAGAAGG CGAAAACGGA GGTTGGAAGG AATTTCTAAA TGTTTACGAC AAAAAATTCG GATCAAGTTT GAGTGATCCT TCGAGACGTT CCAATGATGT GTTGGTTGCT TTTCTTTTGA CCTTCAAAAA GAAAGAAGAT TTGCAGCTAA TAGCTAGGGT TATGCAATGT GGTGCTAATC GTGAACTAAT TGAGAAATTC AAGCAAGAAT CTCCGGACAA AGAGACTCCT GAGCAGAGGC TAGTTCGATT GACTATTACG CATTTCCAGT ACCCTACAAA CTATTCGTTT CCTTCCTACG CTGAGGATTG GTTTGTAACT GAACTTGGAA AGAAGAAGTC CAAAGTGATG AAATCAACTA GAATGCTTGC TATTGATTGT GAGATGGTTA CCTGTGATGA TGGGACCGAG GCTGTAGTTA GAGTTGGCGC AGTGGACCGC GACTTAAAGG TGGTTCTTGA CAAGTTTGTG AAACCGGACA AAACGGTTAT TAACTATAAG ACTGACATTA CTGGAGTTAC TGCTGAGGAT CTTGAGAGAG CTACTCTATC TGTAACAGAT ATTCAGAAAA AATTGCGGAG GTTTCTTTCT CAGGGAACTA TTTTGGTAGG TCACGGTTTG GATAATGATC TTAAAGTGTT GAGGATAGAT CATGCGAGAG TAATAGATAC TTCATTTGTA TTTGAGTTTG AGAATGCACC AAAGACTCAT AGACCTTCTT TGAATAATCT ATGCAAGGCT GTTTTGGGTC AAGAACTGAG AATGCCCGAT GCTGCTCACA ATTGTGTTCA TGACGCAGCA GCTTCCATGA AACTTGTACT TGCTGTTGTA GAAAAAGGAG TAGACACTAC AATCCAAAAA TCTGAAGAAA TGTTGGTGGC TGAGAAGAAA AGACAGGAGG AAAGACAGGA AGCTGGTAAG ACACAGCTCT TCCTTCATAA AATCCCTCAC TATGTTCCAT CTGAAGAGTT ACAAGGAGTT CTTAACGGGG ACTTCACACT CGTAGTTAAG CCACCACAAA AAGAAGGAGG TTATTCTACT GCAGTCGTTG ATTTTAATAG TCCGGAAGAA GCAAATGAAG CATTTGAAAA TGTTGAAGGA GACGTAGCTA AGGATAAATC AGGTTTGCCA CAAAAAATGG TTACACTGAA GCTGAGTTCT GGATTAGTAG CTAGTTTATA TGTTCGTAAA ATGGTTAAAG ATGATTCTCT GAGTGAAATC TCTACAACCA AGAGAGCTCG AACAGAGGAG AACAATGTGA GTTCTAAGAG ACAGAAGACA GAAGATGATT CTGAGGAACC CAAAGAAGCA AATGTAAACC AAAAAGAGGC TGATAAGACA AAGCTCTTCC TTCATAAAAT CCCTCACGAT GTTCCATCTC AAGAGTTACA TGGAGTTCTT AACGGCGATT TCACACTCGA AGTTAAGCCA CCAAAAAGAA AAGGAGGTTA TTACAATGCA GTAGTTGGTT TTAATAATCC AGAAGAAGCA AATAAAGCAT TTGAAAATGT TGTAGGAGAC GTAGTTAAGG AGAAAGCGGG TTTACCACAA AAAATGGTTG CGTTGAAGCT GAGTTCTGGC TCAGGAGCTA GTTTATACGT TCGTAAAATG GTTCAAGATG ATTCTCCGGG TGAAATCTCT ACAACAGAGG AGAACAATGT GAGTTCTAAG AGACAGAAGA CAGAAGATGA ATCTGAGGAG ACCAAAGAAG CAAATGTAAA CCAAAGAGAG GCTGATAAGA CAAAGCTCTT CCTTCATAAA ATCCCTCTCA ATGTCCCATC TCAAGAGTTA AAAGGAGTTA TTACCGGCAA GTTCACACTG GAAGTTATGC AACCAAAAAG AAAAGGAGGT TATTACAACG CATTTGTTGT TTTTAATAGT CCAGAAGAAG CAAATAAAGC ATTTGACAAA GTTAAAGGTG AAGCAGCTAA GGAGAAAGGG GGTTTGGCAC AAAAAATGGT TGCGTTTAAG CTGAGTTCAG GATCAGGAGC CAGTTTATAC GTCCGTAAAA TGGTTCGAGA TGAATCTGAG GAGGCCGAAG AGGCAAATGC AAACCATTGT GAGGATCATT TAAAGGAAAT TGAAGAACTG AAGGAAAAAC TCAAAGCTAA GGACTTTGCA AACAGCTGCG AAGGTCATTC AAAAGAAATT GAAGAACTGA ATCACAAACT CAAAGCTAAG GAACATCAGA TCCAGGCGCA GGATAAGATT ATAGACAACC TCAAAATGAA ACTGGAGAAG AAACAGTCAA AGTCTCGGTA ATGATTTTAA CAGAAATCGA C |
| Length | 2371 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 21052738.. 21056352 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G67240.1 |
| Description | small RNA degrading nuclease 3 |
| TAIR curator summary | |
| Alias | [SDN3][small RNA degrading nuclease 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 25.6125 |
Ahg481009 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 28.0357 |
Ahg482958 | Ribosomal L29 family protein |
| 28.3549 |
Ahg480608 | CCAAT-binding factor |
| 28.4077 |
Ahg495959 | Ribosomal protein S4 (RPS4A) family protein |
| 36.3318 |
Ahg480841 | Transducin/WD40 repeat-like superfamily protein |
| 49.94 |
Ahg359673 | BRCT domain-containing DNA repair protein |
| 50.7346 |
Ahg475169 | R-protein L3 B |
| 53.963 |
Ahg493988 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| 55.7494 |
Ahg486246 | Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) |
| 57.6628 |
Ahg314644 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|