Detail



ID : Ahg951997

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951997|scaffold_28700001.1
Sequence
CTCATTGCTT CTAACTCGAG GGATGGCTTT AGCGGTGGAT CTGCTCTTCT TCTACACACT CTCTATCGGT CGAACCACCG GACCAACGTG TCTTCACATG GACGGTGCAT TCGCGGCGGT GGTCACATGT GGCTTCAATT CACATGTGGC TTCAATTTAC GTCTCCCGAG ATTCGCTTGT CGTTGGTTGT GGCAAGCTCG TTTGGGATCC ACGCGCCATC GCGTCTTACT ACGCACGCTT TCATCCTCCA TGTCTCTCAA GTGACTTTTC AAAGCAACCT TCAAACTATT ACAATATTAT GAAAATAACC CTAAACGTCT TATTAGTATC AAGAAAGCCC CCATGAATCA TTTGAAAGTG TTACAT 
Length366
Protein Sequence
Protein Residue
Map Locationscaffold_287: 3262.. 3627
Download Sequence
A.thaliana
AGI-codeAT5G15410.1
DescriptionCyclic nucleotide-regulated ion channel family protein
TAIR curator summary'defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile. Conducts Ca2+ into cells which is linked to the generation of NO and the NO signaling pathway involved in the innate immune response to pathogens.
Alias[ATCNGC2][CNGC2][DND1][CYCLIC NUCLEOTIDE-GATED CHANNEL 2][CYCLIC NUCLEOTIDE GATED CHANNEL 2][DEFENSE NO DEATH 1]
Gene coexpression
MR
MR Locus Description
4.24264 Virus1574
8.48528 Virus0941
13.4164 Virus1511
19.7484 Ahg946739 Thioredoxin superfamily protein
23.9165 Ahg905716
26.9815 Ahg921526
29.5973 Ahg476775
37.229 Virus0803
42.332 Ahg894291
50.4579 Ahg895620 receptor for activated C kinase 1C
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression