Detail



ID : Ahg952095

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952095|scaffold_37200001.1
Sequence
TCTCTCCGCC GGCGGGAAAA CTATGTCGCA CTTCGGAAGG TCAGGTCCAC CGGATATCAG CGACACCTAC TCGCTTCTCG TCCTTAACAT AACCTTCCGT ACGACTGCTG ATGATCTCTA TCCTCTATTC GCAAAGTATG GAAAGGTCGT TGATGTCTTT ATTCCCAGAG ATCGAAGGAC TGGTGATTCG CGTGGTTTTG CGTTTGTTCG GTATAAGTAT AAAGATGAAG CTCACAAAGC AGTGGAAAGG CTTGATGGTA AGATTCATCC ACTATTATTG GTTTTGTTAT ATGTGTTTAT GCTTTTGGTG CTTGGATTTG ACATGAAGTT TCTGTCTCTG TTTCAGGAAG AGTTGTCGAT GGCCGAGAAA TAACTGTTCA GTTTGCGAAA TAT 
Length393
Protein Sequence
Protein Residue
Map Locationscaffold_372: 22.. 590
Download Sequence
A.thaliana
AGI-codeAT5G64200.1
Descriptionortholog of human splicing factor SC35
TAIR curator summaryencodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.
Alias[At-SC35][ATSC35][SC35][ortholog of human splicing factor SC35][ARABIDOPSIS THALIANA ORTHOLOG OF HUMAN SPLICING FACTOR SC35]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg918667 Phosphotyrosine protein phosphatases superfamily protein
9.21954 Virus2596
31.241 Ahg907080 Aldolase-type TIM barrel family protein
48.1975 Ahg912355 MLP-like protein 423
51.614 Ahg930931 RNA polymerase subunit alpha
57.2364 Ahg937251 methylenetetrahydrofolate reductase 2
68.9348 Virus0906
70.4486 Ahg952676 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein
71.7496 Virus1771
73.212 Virus2589
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression