Detail



ID : Ahg952131

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952131|scaffold_39600002.1
Sequence
GATATAAAGC GGAGAGAGAG ATGGGAGCAT TCATGTCAAG GTTTTGGTTC ATGATGTTTC CTGCAAAAGA GTATAAGATT GTTGTGGTTG GTTTGGATAA TGCTGGTAAA ACGACGACGC TTTATAAACT TCATTTGGGT GAAGTTGTTA CTACTCATCC TACTGTTGGG AGCAATGTTG AAGAGCTTGT TTACAAGAAT ATCCGCTTCG AGGTTTGGGA TCTTGGTGGG CAAGATAGGC TAAGAACTTC ATGGGCAACA TACTATCGCG GAACACATGC TGTGATTGTG GTTATCGATA GCACAGACAG AGCCAGAATC TCTTTCATGA AAGATGAGCT CGCCAGGTTA CTTGGTCACG AGGATCTTCA AAACTCGGTC ATACTTGTGT TTGCAAACAA ACAGGATCTG AAAGATGCGA TGACTCCTGC TGAGATCACG GATGCACTTA ACCTTCACAG TATTAAGAAC CATGATTGGC ATATTCAAGC AAGTTGTGCA GTTACTGGAG AAGGATTGTA CGATGGGCTT GGTTGGATTG CCCAAAAAGT TACCGGTAAA GCCACGAGTT AAGGGAAATC GGAGAGCGTA CT 
Length592
Protein Sequence
Protein Residue
Map Locationscaffold_396: 2010.. 3288
Download Sequence
A.thaliana
AGI-codeAT3G22950.1
DescriptionADP-ribosylation factor C1
TAIR curator summaryA member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica), other ARFs and ARF-like proteins.
Alias[ARFC1][ATARFC1][ADP-ribosylation factor C1]
Gene coexpression
MR
MR Locus Description
1 Ahg930294 ADP-ribosylation factor C1
38.9615 Ahg934641 nuclear factor Y, subunit B1
72.0278 Ahg494273 Protein kinase superfamily protein
97.4987 Ahg481925 UDP-Glycosyltransferase superfamily protein
98.0561 Ahg484840 FAD/NAD(P)-binding oxidoreductase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression