Detail


ID : Ahg930294

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930294|scaffold_302751.1
Sequence
GATATAAAGC GGAGAGAGAG ATGGGAGCAT TCATGTCGAG GTTTTGGTTC ATGATGTTTC CTGCAAAAGA GTATAAGATT GTTGTTGTTG GTTTGGATAA TGCTGGTAAA ACGACGACGC TTTATAAACT TCATTTGGGT GAAGTTGTTA CTACTCATCC TACTGTTGGG AGCAATGTTG AAGAGCTTGT TTACAAGAAT ATCCGCTTCG AGGTTTGGGA TCTTGGTGGG CAAGATAGGC TAAGAACTTC ATGGGCAACA TACTATCGCG GAACACATGC TGTGATTGTG GTTATCGATA GCACAGACAG AGCCAGAATC TCTTTCATGA AAGATGAGTT CGCCAGGTTA CTTGGTCACG AGGATCTTCA AAACTCGGTC ATACTTGTGT TTGCAAACAA ACAGGATCTG AAAGATGCGA TGACTCCTGC TGAGATCACG GATGCACTTA ACCTTCACAG TATTAAGAAC CATGATTGGC ATATTCAAGC AAGTTGTGCA GTTACTGGAG AAGGATTGTA CGATGGGCTT GGTTGGATTG CCCAAAAAGT TACCGGTAAA GCCACGAGTT AAGGGAAATC GGAGAGCGTA CT
Length592
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9695462.. 9696677
Download Sequence
A.thaliana
AGI-codeAT3G22950.1
DescriptionADP-ribosylation factor C1
TAIR curator summaryA member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica), other ARFs and ARF-like proteins.
Alias[ARFC1][ATARFC1][ADP-ribosylation factor C1]
Gene coexpression
MR
MR Locus Description
1 Ahg952131 ADP-ribosylation factor C1
33.9117 Ahg488592
33.9853 Ahg942919
37.0135 Ahg492087 Ypt/Rab-GAP domain of gyp1p superfamily protein
48.2804 Ahg473032 Protein of unknown function (DUF616)
56.2317 Ahg477817 peroxisomal adenine nucleotide carrier 1
59.8164 Ahg950552 exocyst subunit exo70 family protein B1
73.7157 Ahg482961 alpha/beta-Hydrolases superfamily protein
79.2149 Ahg493917 succinate dehydrogenase 2-2
79.3095 Ahg488790 SNARE associated Golgi protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression