Detail



ID : Ahg952354

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952354|scaffold_63600001.1
Sequence
TTAGTGCTTG TATAGAGAAC ATGGCGGCAG GTGAAATAAT CACTGAGCAG CCTCCAGAAA GCATAGTAGG ATTGATCGAG AAAATGGCAT ATGTGGTTGC ACTAAGGGGG CCGGAGTTTG AGAAGGAGAT GATAATCGTT AATAGGGGAG ATACAACTTT CAGCTTTATG AGTAGCTCAG ACCCTAATCA CGCTTTGTAC CAGCAAAAGC TTACTGAATA TCAAGGAGGT AAACCTCCGG ATTTCCAACC TAATACTCCA GCTACTCGTG AGCCTAAGGG CAAAGCACAA TCCTATGATC TTGAGCCTCC TCCCTCAAAG GAGCCTCGAT ATACCGAGAT CTCACGCAGG GAGAAGGAGC TTTGTACTAT TAAGCTCATT GCGCAGTTTG TGGCGCGGTA TGGGAAGCTT TTTCATGAGG ATTTGAAGCG TGTAGGTGTT ATGAGCCCTA TGTTTGACTT TATTAAGCCA ACTAATAGCA ACTTCGGTCT TTATAATGCC CTCGTTACTT CGTATTCACG AGTATTAAAA CCTTCCCTTG GTTCTCCCTT CTTTCTTGAT CGTATTTTCG ACCATCTTCA ATTGGAGAAG CTGGAGGAGG GAAGTGAGAC TGCTATGATT GATTTGTTTG ATTTTGTGGG TGGTGTTGAC TTTTTTGCTC ACATGGACGA TGCTCACTAT CCTGCTATCC TACCACCACC TCAACCCTTT TCAATGATAA CGCACTTGTC TGATTTGCAA GCTGATGATT CAGCTATTCA TGAGTGTGTA GGCCATGCAG AAACCAGTCT TGGGCCTCCT ACTATAAGGA TCACACCCAA GGAGTTCGGT GTTATTAAGC TCACAGCGTT GTTTGTGGCG CGGTATCGGA TGCCTTTTCG TCGGGCTTTG ATGATGAGAG TGGCTATGAA CCCTCTGTTT GAGTTTATGT TCTTTCTCCC GTCTTCTCTG AAGAAAAGAC TACTGTTTAC GGACTACCCT TCTCTGACGA AGAGAGTACT GTTTACGGAC CCTTCGTTTG GGTTTGTGGA GCCAACCGAG ATCAGGTTCA ATATTTTCAA TTTGCTTGTT GATGCGTATT CCAGAGTATT ATTCCCTTGC AAAAAGCTGA AGAAGAGTGA TGCTTGTACG AGGGCCGTTG TTGATTTTTT TCTCAAACTC CTTCACTTGG AGAGGCTGGA GGAGGGAGTG GCGGCTGCTG TGATCGATTT GCATGCTTTT GTGGGTGGTG TTGACCGTTT TGCTCACCTT GATGATGAAG ATTATTCTGC TTCCATGCCA CCACCTGAAC GCCTTTCAGT GATGATGAAC CGGGTAACAC TATCTGAGCC TGATATGCTT TTGCAGCTTC CATTGGGATC TCAGCTTGCT AGTGTTCGTA AGCAATACAA ATGTGTAGGC GATATCGATT CTTTAAGGGC TCCTACTCTA AGAAGCGTAA CATTTAGAGT CCCTGGAAAG GGGATCACAC TCAAGGAGCT TGGTATTATT AAGCTCACAG CGCAGTTTGT GGTGCGGTAT GGGTATGATT TTTGGTGTGT TTTAACGGAT AGAGTGTCTA CGAACTCATT TTTTCAGTTC TTGAATCCTT TCGATAAGCA GTTCCGTTTT TACTGTGGGC TTTTACTTGC GTACACCGGA GTGCTAAAAC CTTCTAAAAT GGGTTTTTCC ACCGACTTCA ACTGTGGAAG CTGGAGGAGG GAGTGGAAAC GGCTATGATT GATTTGCATG CTTTTGTG 
Length1738
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13478285.. 13480062
Download Sequence
A.thaliana
AGI-codeAT5G06520.1
DescriptionSWAP (Suppressor-of-White-APricot)/surp domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.49 Ahg948966
16.6132 Ahg948572 alpha-1 tubulin
30.3974 Ahg905519 CDPK-related kinase
31.9687 Ahg924359
32.4962 Virus3098
32.8634 Ahg337006
35.7491 Ahg943037
42.2847 Ahg893193
48 Ahg903319 Defensin-like (DEFL) family protein
52.915 Ahg351693
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression