Detail



ID : Ahg952388

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952388|scaffold_66800001.1
Sequence
CATTCGCGGA CGTGTCTTCA CATGGACGGT GCATTCGCGG CGGTGGTCAC ATGTAGCTTC AATTTAGATT GGCTTACGTC TCCCGAGATT CGCTTGTCGT TGGTTGTGGC AAGCTCGTTT GGGATCCACA CGCCATCGCG TCTCACTACG CACGCTCTCA TCCTCCATGT CTCTCAGGGT GACGATCCTG ATTTGTTGCA GAGAGGATTT AACCCGCGGT GGTTTGTGGC TTGGAAAAAA AGAGGTATTA ATCGTTTGTT GCTGGATGAG TAAGAATTGA TAGAGACGTT TGA 
Length293
Protein Sequence
Protein Residue
Map Locationscaffold_668: 3775.. 4219
Download Sequence
A.thaliana
AGI-codeAT5G15410.1
DescriptionCyclic nucleotide-regulated ion channel family protein
TAIR curator summary'defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile. Conducts Ca2+ into cells which is linked to the generation of NO and the NO signaling pathway involved in the innate immune response to pathogens.
Alias[ATCNGC2][CNGC2][DND1][CYCLIC NUCLEOTIDE-GATED CHANNEL 2][CYCLIC NUCLEOTIDE GATED CHANNEL 2][DEFENSE NO DEATH 1]
Gene coexpression
MR
MR Locus Description
0 Ahg926590 Cyclic nucleotide-regulated ion channel family protein
6.16441 Ahg925602
7.93725 Virus3111
9.38083 Ahg949089
11.7473 Virus3066
11.8322 Virus2942
20 Virus3732
20.4939 Ahg888434
21.3542 Ahg936029 F-box family protein
21.3542 Ahg936026 F-box family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression