Detail



ID : Ahg952512

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952512|scaffold_81400002.1
Sequence
AAGCTTTTAG AAACGGCGAC AATGGCGGCT ACGAAAGCTC TGGGATTTGT TTTGCCGACG GGATTATTTA TACAGCCGTC GTTGAACCGT CGCGGAGGAG TTAGGGTCTC CGTCTTCCAG TGTTCCGTTT CTTCACTCAC CTCTACAGGC ACCGATTTCC CCATTTCCTT ATTTGCACTG TTTGATCTTT TCCCAGAACT TTGGATTGAA ATTGGACTTC TGGAGAAACC TTGGAGCTCA TACAATGCTA GGCTTGTGTT AGAAGATGGC TCTATGTGGT CGGCTAAGTC TTTTGGTGCT TCTGGAACCC GTGTTGCTGA ATTGGTTTTT AACACCTCTT TGACAGGGTA TCAAGAAATT CTGACTGATC CTAGTTATGC TGGACAATTT GTGCTTATGA CAAATCCTCA GATCGGTAAC ACCGGTGTCA ATCCCGATGA TGAAGAATCA AGGCAATGTT TTTTGGTGAT AAGAAGTCTT AGCATCAGTA CCTCAAACTG GAGATGTACG AAAACACTTG GTGACTATCT AGCAGAGAGG AACATTATGG GAATCTATGA TCTTGACACA CGGGTTATTG CATATGATTT CGGGATCAAG CAAAACATCC TAAGACGCTT GGCATCATAC GGCTGTGAAA TCACGGTTGT CCCATCAACA TGGCCAGCTG CAGAGGCTCT TAAAATGAAT CCAGACGGAA TTCTATTCAG CAACGGTCCA GGAGATCCTT CTGCAGTGCC TTATGCAGTT GAAACGGTTA AAGAGCTTCT AGGAAAAGTT CCTGTCTATG GAATCTGTAT GGGTCATCAG TTACTTGGAC AAGCTCTTGG AGGTAAAACC TATAAGATGA AGTTTGGTCA TCATGGAGGA AACCATCCAG TTTGTAACAA CAGAACGGGC CATGTCGAGA TCAGTGCTCA GAACCATAAC TATGCAGTAG ACCCAGCTTC TCTCCCCTCC GGTGTCGAAG TGACTCATGT CAATCTCAAC GATGGAAGTT GCGCTGGTCT CTCTTTTCCG GCAATGAATG TCATGTCTCT TCAGTATCAC CCTGAGGCTT CTCCTGGACC TCATGACTCC GATAACGGTA TTACACTATT CTTTTCCCTC TTGTCTGGTA ACTATCAAAA CGCAAAGGCT ATGCATTAAT CTTTGCCTAA TCTTTTCAT 
Length1169
Protein Sequence
Protein Residue
Map Locationscaffold_814: 533.. 2927
Download Sequence
A.thaliana
AGI-codeAT3G27740.1
Descriptioncarbamoyl phosphate synthetase A
TAIR curator summarycarbamoyl phosphate synthetase small subunit mRNA (carA),
Alias[CARA][VEN6][carbamoyl phosphate synthetase A][VENOSA 6]
Gene coexpression
MR
MR Locus Description
15.9687 Ahg912754 SAUR-like auxin-responsive protein family
17.6635 Ahg492818 Tapetum specific protein TAP35/TAP44
30.8058 Ahg890810 hAT transposon superfamily
43.6692 Ahg493117 tRNA/rRNA methyltransferase (SpoU) family protein
45.5192 Ahg928170 Cystatin/monellin superfamily protein
53.4977 Ahg477030 gamma-glutamyl hydrolase 1
58.7452 Ahg943306 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
62.45 Ahg933830 cellulose synthase-like B
73.8783 Ahg890991 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
75.2396 Ahg477416 myb domain protein 106
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression