Detail


ID : Ahg952661

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952661|scaffold_900012.1
Sequence
TCCATAGTAC CTGCAGCCCC ACGGACTTAA TATTCCTCAT TTTAGAAAGC GGAGGGAAGG GATCTCTTTT CTGCAACGGA AAAAAAACGG AGCAGATTTG ATTCGGCACA ACCTAACGAT ACATCCAATA CCAATGATCT GTGCCTAGAA TGCGTTGCTA GATCTCTGTT CTAAAAAGCT ATACAGGCAA CAATAAAGTT GACCGGGGGC GGGTCTTCCC TTTCATTACT TATTTCACGA CGAGGGAACC GCGCCCGCAT CAGTCGAAGT GGTGCCCTCC TCGAAGAAAG AGGGTTTCAG TCTCATTCAA CCAACTCTCT TTTTGAAGCA GATAGTTCAC GAGATAATTG AGTAAGTTAA GATAGATGTC ACAATTTGAA CCAAAGGCCT TTTTAGTGAT TAGTCTGCTA GTTTCTTTGA TCTTAGTCGG TGTAAATTAT TCCTTTTTTT TTCTCAAGTC AAACCGGAAG GAGAAAATAC CCTAATTTTT CTCTTATCCA TCGTCTTCTT GGTAGCAAGT TTTTTTGTCT TTGTTGTTAG TCACCAACTT ATTTACCCAG AAATAGATAA GGGGGATTTA GTAAATCCAC TTCTGGTGCT GGCCCAGCTG TCGTGTCTAT TGGTTCTCTT TAGCGGCTCA AGAGCCGCTT ACGCAGGCGC CAGCACCGGC TGAAGTTGCC CATCCCGTTC CTAACCAATC TCCTCTTGGG GGGAACGGGG GAAATCGCTA GATCCCCCAT GGGATCAAAA ACAACCTATC ACCGAAGTCC CACCTATTCA AAAAAAATGG TGCCTGAACC GACGGGAAGC TCTTTTTCGC AGGGTCAGAG GGCTGCCGCG CCTTGCCGCA GCAGCGGGGC CTACGGTCGG ACAGCTGGGA CGTGTCTGTT GTGAGGCTTG CGGGGAAGCT TGCCTGGATT ATCGCCCGTG CCTGTTGTCA GGAATGCGCG CGTGTCTCCC TAACCTAAAT ATCAAGGACT TCAGGTGTTC GGTCGAGCTT GTCATCTAAT AACATTTGAA TTTATCTTAG ATTCCACGTT CCCGAAATGG ATCTTATCAA ATATTTCACA TTTTCTATGA TTATTTCTAT TTTAGGTATT CGGGGAATCC TCCTTAATAG ACGAAATATT CCTATTATGT CAATGCCAAT TGAATCAATG TTATTAGCTG TGAATTCGAA CTTTTTGGTA TTTTCCGTTT CTTCGGATGA TATGATGGGT CAAGTATTTG CTTCATTGGT TCCAACGGTG GCAGCTGCGG AATCCGCTAT TGGGTTAGCC ATTTTCGTTA TAACTTTCCG AGTCCGAGGT ACTATTGCTG TAGAATTTAT TAATAGCATT CAAGGTTAAC CATTCCTCTC CTTTCAGTCG CTCGTCGAGA CCTGGTGGAC CTTACAGTCG AGCTCCTTTG TTCCTTCGGA CCTCTTCTTT CAGTCGAGTC ACTTTGTACC TCTTCTCAAA TAAGGAAAAT ACGAAGTTCT CTTCTCCTTT CGTTCTCTTT TTTTCTTGGT CGGCAGGGTC AGGGCCTTTC TCGCTGGGCG AGCGCATCCG ATTCAAAAGT CCTTTCCTAA ACCACTTCCC GTTCAGTTGC TGAAAAATAA ATGGGGATAA GCTTTCTAAA TGAGATTGAG TTCGACGAAT ATGGATGCTA GAAAGATGTT ATTTGCTGCT ATTCTATCTA TTTGTGCATT AAGTTCGAAG AAGATCTCAA TCTATAATGA AGAAATGATA GTAGCTCTTT GTTTTATAGG CTTTATCATA TTCAGTCGTA AGAGTTTAGG TACGACTTTC AAAGTGACTC TCGACGGGAG AATCCAGGCT ATTCAGGAAG AATCGCAGCA ATTCCCCAAT CCTAACGAAG TAGTTCCTCC GGAATCCAAT GAACAACAAC GATTACTTAG GATCAGCTTG CGAATTTGTG GCACCGTAGT AGAATCATTA CCAATGGCAC GCTGTGCGCC TAAGTGCGAA AAGACATTGC AAGCTTTGTT ATGCCGAAAC CTAAATGTTA AGTCAGCAAC ACTTACAAAT GCCACTTCTT CCCGTCGCAT CCGTTTTCAG GACGATCTAG TCACAAAGTT TTACACCTTA GTGGGGAATC AATTTGCCTA CTCTTGTATC TCGAAAGCAG AAAGAGTAGA ATTCATTCGA GAGAGCTTGG TGGTCTTAAG AATGGTTCGG GGGGGGGGGG GGTTTCTCTT AAGAATAAAG AAGAGGAATT GAATCTAATT GATGTTCATG CT
Length2242
Protein Sequence
Protein Residue
Map Locationscaffold_6: 16797156.. 16799393
Download Sequence
A.thaliana
AGI-codeATMG00640.1
Descriptionhydrogen ion transporting ATP synthases, rotational mechanism;zinc ion binding
TAIR curator summaryencodes a plant b subunit of mitochondrial ATP synthase based on structural similarity and the presence in the F(0) complex.
Alias[ORF25]
Gene coexpression
MR
MR Locus Description
17.5784 Ahg930984
22.1811 Ahg930992
33.8378 Ahg475597
60.6465 Ahg931018
63.2772 Ahg319376 NADH dehydrogenase subunit 4
72.0486 Ahg489701
83.9166 Ahg907879 Tetratricopeptide repeat (TPR)-like superfamily protein
86.1162 Ahg930999 Ribosomal protein S12/S23 family protein
86.3944 Ahg351609 Protein of Unknown Function (DUF239)
87.4528 Ahg315511 CemA-like proton extrusion protein-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression