Detail



ID : Ahg314636

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|314636|fgenesh1_pm.C_scaffold_1003416
Sequence
ATGAGTGCGT CGATTTTACT CGGGAAGTTA AACGGCGATG AATCATCTAC GGTGACCACC GAGGAAGACG AAGAAGCTGT GTTTTCCGGT GAAGAGTGGT CTGGGGAGAA TCTTTATTGT TTTTACTTCG TGAAGCAATT CGCTTACGAC GACCCTGAGA TTAAGACCAA GATTGATGAA GCTGATAATG AGATTTATCA TTGTAACACT AACCGGATTC ACATTGCTAA CAGATTAAAA TCCAAAAGGG CTGAGAGATT GTCTCTGGTT GCTTCAATGG AGAATTTGAG TTCATCACTT GATGAATACA ATGCTGTAGG GAAGGAACAA GAAGTGGTTA CAAAGAGAAT TTACAGCTTG AGTGAAAGAT TAAGTGACAT TAAGATGGAG ATTGAGTTGT TGGATGTTCA AATGGCTTGT GTACTTGATC AAAGAGACAA AGCCGTCGAA AGGATTAAGT TCTTGAGGAT ACAACGAGAC AAAGGGAATG CTGCCTTTTA CCGGAGTCGT GTTGTCATGA AGAAAGCTAT AGAGTTGGCT GCTTCTGGAA ATGTTAGAGA TCTTGAAGAG CTCGCTGATT TTGAGGTTGA AAATTTTATG TCTCGTTGGA ACAATGACAA GGCTTTTAGG GAAGATTACA AGAAAAGAAT CTTGCCTTCA CTTAATGAGC GAAAGCTGAG GCGCGATGTG CAGATTAGGG ACCTAGAAGG CGATATAGAT ACTGAGAATG GAAATGAAAC AGTGGGGAAA AATGCAATAG AATTCAAGAG GTTTAGTACT GAGGAGAAGA GTGATGATGT TATGGATTTT GATATACCGG TGTATGAAAA GCTTGGAAAG GAGGAAGAAG AGATTGATGA AGAAACTTTG AAGGAGAAGA AACGGGAAGA GCAGTTAGAG AAAGCTCGAC TAGCGATGGA AAGGAAGAGG AAACTACATG AGAAAGCTGC TGCTAAAGCT GTCATAAGAG TTAAGAAGGA AGCTGAGAAG AAACTTAAGG AGCTTGAGAA GAGAGCGAAG AAGAAGAAGA AGGCTGCATT TAACTCTTCT TCTATGAATG TAGACAGAAC AACTGAGACA GTCACCGAGG CATCAGAACC AGAAAAGGAG AAGCTATTAA ATGGGAGATC AGTGTTTCCA AAACAGAGAA GTTTTTGTTA TAGACATCAC GGAAAAGGAA ATGACGCTGT CCTCAAAGCC ATCATAAAGC GTAGAAAAGC TTATAGGTTA TGGGTTTGGA CTGTTTCCTC CTCTGCAATT GTTCTCTCAC TCACTCTCCT CGTTATATTC TTATACAGAC GAGAACAGGC AGCTATGGCT GTCAGAAGCT TGGCTCCTCC ATGGATCATC TTGCGACAAA CTTTCCGGTC AGTCGCAGCA TCTTCTTACC TTCACTCAAA TCAAAAAACC CTAATCTCAA ATCTCTCTAT TCCCGCTTCG TTTCCTCTCC GACATTCAGC TTTGAGAAGA TGTTACATTG CAGAAGCTAT AAAAGGAGAT GTAGATTTTC TACTCAAAGG AGTTGGAGAC CAAGCTGTTG CCAAAGAAGT CAAGCAAATT CTTGAAATGG CGAGACGGGC AGCATCAAAA AGAGAAGTTC TTCATACAGA TTTTCTCACA CCACCTATTG TTAAGGAATC AGTTTCAGTA TTGGAAAAAT TTGCTGATGT TAAGATAGTT ACTCAAGGAG GTTACCCTGA GGCTGAGCGG TGTAGGATCT CGATTGGACA TCCTGATGTT CTAACTAATG ATCCAGATAT AGTTGCTGCT TTGAGTATCA CAGGGAATTT CGGGTTTCAA CCATGTTCTC ATGGTGACTT CCTTGGTGCG ATTCTTGGCA CGGGAATTTC CAGGGAGAAA CTTGGTGATA TTTTAATTCA GGTTGGAAAC GTTGGTGTAA TTTGTACTAA GATACCTTTG CTTGCTCTTG AATACGAACC ACCTAGGACT AATTCCTTTA AAACCGTGGA AGCCTCGTTG AGAATTGATG CAGTAGCTAG TGCTGGTTTC AAGATTTCGC GGTCAAAGCT AGTTGATTTG ATTAGTAACA AGGACGTTCG GGTTAACTGG GCAACCGTTA CCAAGAACGG AACCACGGTG AAGACCGGTG ATGTTGTCTC CGTTAGCGGA AAAGGGAGGC TTAAGATTGG AGAAATCAAT GAAACGAAGA AAGGGAAATA TGCAGCTCGT CCCTTTATTC GCTTTTACGC CATTGCAAAT GTTGTAGCTC GCGACGTGAC ATCTCATTCC TTTCTTGATC TTCTTGTAGT GGGAAACTAG 
Length2280
Protein Sequence
Protein Residue
Map Locationscaffold_1: 26916122.. 26921503
Download Sequence
A.thaliana
AGI-codeAT1G53110.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg312926 cytomatrix protein-related
9.48683 Ahg478644 SNF2 domain-containing protein / helicase domain-containing protein
17.7482 Ahg491316
27.9285 Ahg353720 ARM repeat superfamily protein
31.0161 Ahg326105 DNA repair protein Rad4 family
33.6155 Ahg893725
36 Ahg485877 Peptidase M28 family protein
36.4143 Ahg323324 RNA helicase, ATP-dependent, SK12/DOB1 protein
40.3733 Ahg330245 acetyl-CoA synthetase
41.4729 Ahg496171 Thioesterase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression