Detail


ID : Ahg330245

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330245|fgenesh1_pm.C_scaffold_7002472
Sequence
ATGAAAATAG CTTCTCCTTC TTCTCCGATT CTCACCGTTG TCTCCAGCTC AGGCTCATTG GATTCGAAAA TTAGTGGATC ACTTGGATCT CGAATCCTTC CGGCTACTCA AAGATCATCC CCATCGGACA ATCTTATCCT CCATAGGACA ATGTCGTCTA ATTACCTGAG GCATGTGGAG TCCATGTCCC AGCTACCCTC AGGTACCGGA AAGATCTCTC AATTAAACGC CGTTGTTTTA GGAGAATCCC TTGCATCGGA GGAGAATGAT CTCATCTTTC CCAGCAAGGA ATTCTCCGGC CAGGCTCTTG TTTCCTCCCC TCAACAGTAC ATGGAAATGC ATAAGAGGTC GATGGATGAC CCTGCTGGTT TTTGGTCTGA CATTGCATCT GAGTTTTACT GGAAGCAGAA ATGGGGTGAC CAAGTGTTTT CCGAAAATCT CGATGTCAGG AAGGGTCCTA TTAGCATTGA GTGGTTTAAA GGGGGAATCA CCAATATTTG CTACAACTGT TTGGACAAAA ACGTTGAAGC TGGGTTTGGT GATAAAACAG CCATATACTG GGAAGGAAAT GAACTTGGGG TAGATGCTTC CTTAACTTAT TCTGAATTGC TCCAACAAGT TTGCCAGCTT GCTAATTACT TGAAAGATAA TGGAGTGAAG AAGGGTGATG CTGTTGTAAT TTATTTACCT ATGTTGATGG AACTTCCCAT TGCTATGCTT GCATGTGCAC GGATCGGAGC TGTTCATTCG GTCGTTTTTG CGGGATTTTC TGCTGACTCT CTTGCCCAAA GAATCATTGA TTGCAAGCCA AAAGTGATAC TGACTTGCAA TGCTGTTAAA AGAGGCCCTA AGACCATAAA CCTTAAAGCT ATTGTTGATG CTGCACTTGA CCAATCTTCT AAAGATGGAG TCTCTGTAGG CATATGCTTG ACCTATGACA ACTCATTAGC GACAACAAGG GAAAACACGA AATGGCAGAA TGGAAGAGAT GTGTGGTGGC AGGATGTCAT TTCTCAATAT CCAACATCGT GTGAGGTGGA ATGGGTTGAT GCGGAAGATC CCCTGTTTTT GCTCTACACA AGTGGAAGTA CCGGGAAGCC AAAGGGTGTC CTACACACAA CTGGAGGGTA TATGATCTAC ACTGCTACAA CATTCAAGTA TGCATTTGAT TACAAATCAA CAGATGTATA CTGGTGTACA GCAGACTGTG GTTGGATAAC TGGCCATAGC TATGTTACTT ATGGACCAAT GCTAAATGGA GCCACTGTTG TTGTCTTTGA AGGGGCTCCA AACTACCCTG ATTCTGGACG CTGTTGGGAT ATTGTTGACA AATACAAAGT TTCCATATTT TATACTGCCC CAACATTGGT GAGGTCTCTC ATGCGTGATG ATGATAAGTA TGTAACACGT CACTCTCGCA AATCGCTACG GGTCCTTGGA AGTGTGGGAG AGCCCATCAA TCCTAGTGCC TGGAGATGGT TCTTCAATGT AGTCGGTGAC TCAAGGTGTC CCATTTCAGA TACGTGGTGG CAAACTGAAA CTGGTGGCTT CATGATAACC CCATTGCCAG GTGCTTGGCC ACAGAAGCCT GGTTCAGCTA CTTTCCCTTT CTTTGGTGTT CAGCCTGTCA TAGTTGATGA AAAAGGCATT GAAATCGAAG GCGAGTGTAG TGGTTATCTT TGTGTCAAAG GTTCATGGCC TGGGGCGTTT CGAACTCTAT TTGGGGATCA TGAAAGATAT GAAACCACAT ACTTTAAACC TTTTGCCGGA TATTATTTCA GTGGTGATGG TTGCAGAAGA GACAAGGATG GTTACTACTG GCTTACAGGG AGGGTTGATG ATGTTATCAA CGTCAGTGGC CATCGAATCG GAACTGCTGA AGTGGAATCT GCTCTGGTTT TACATCCTCA ATGTGCAGAA GCAGCTGTTG TAGGCATAGA ACATGAGGTA AAAGGTCAGG GAATTTATGC GTTTGTCACT CTTCTGGAAG GTGTTCCTTA CAGCGAGGAG CTTCGGAAAA GCCTAGTACT AATGGTCCGA AATCAGATTG GGGCTTTTGC AGCACCGGAC AGAATACATT GGGCACCAGG GTTGCCAAAG ACGAGAAGCG GAAAGATAAT GAGGAGAATC TTGAGAAAGA TTGCTTCAAG GCAATTAGAA GAACTCGGAG ATATTAGCAC ACTCGCGGAT CCTAGTGTAG TTGATCAGCT TATTGCACTT GCCGATGTGT GA
Length2232
Protein Sequence
Protein Residue
Map Locationscaffold_7: 18542725.. 18548196
Download Sequence
A.thaliana
AGI-codeAT5G36880.2
Descriptionacetyl-CoA synthetase
TAIR curator summaryEncodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway
Alias[ACS][acetyl-CoA synthetase]
Gene coexpression
MR
MR Locus Description
9.16515 Ahg472658 Protein of unknown function (DUF626)
9.27362 Ahg486427 diphthamide synthesis DPH2 family protein
13.4164 Ahg331395 zinc knuckle (CCHC-type) family protein
14.2478 Ahg494615 myosin 2
14.8324 Ahg495572 RNA-binding protein 45A
17.8885 Ahg473661 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
18.735 Ahg323999 Structural maintenance of chromosomes (SMC) family protein
23.5584 Ahg493575 xylogalacturonan deficient 1
25.0998 Ahg478965 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
25.1396 Ahg484426 eukaryotic release factor 1-3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression