Detail


ID : Ahg318838

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318838|fgenesh1_pm.C_scaffold_3001854
Sequence
ATGTACTTAG CAGGCACACG CCTTAACCAC TCGGCCAAAG CGACTGTTTT CAACGATTTC GAATTCGAAG GCTCAGAGAA GAAGAAGAAG AAGAAGCTCC TCGAAAGTTT CAATCGATTT GATAATCCAA ATCAGGAGGC ACTGCTAATA CTCTGCGCAA TCGATAATGT TCTACAGAGG GTAAGCCCTA TAATTATCTC TGACTTATAT GGAGATGGTC CTGATGGGCG TGAGATGGGA CCTAAGCGTC AAAGAATGAT TGATCAAGGT CCTCCTGGAC CATTTTATGG ACCTCATCCT GGTTCTGGCT TTATGTATAA CCCTTATGGA TTTGTTGCTC CTCCTCCACC TCCTCCTTTT CCTGCTGTTC GACTCCGTGG TTTACCCTTC GATTGCGCAG AGATTGATGT AGTAGAGTTT TTTCATGGTT TGGATGTGGT TGATGTCTTG TTTGTTCACA AGAACAATAA GGTCACTGGA GAAGCCTTTT GCGTTTTGGG TTATCCCCTC CAGGTTGATT TTGCTCTTCA AAAGAACAGG CAGAACATGG GAAGGAGATA TGTAGAAGTT TTTAGGAGTA CGAAACAGGA GTACTATAAG GCTATTGCTA ATGAGATTGC CGAATCTCGT GCCCATGGTA TGGCTAGTGG CGGTGGTGGA GGTGGCGGTG GAGGTACAGG TGGTGGCAAT GGAGGTGGAG GTGGTGGCGG TGGAGGTCGA ATAAGTGGTG GAAGTTCACC TCGCAGACAT GTGCAGAGGG CTAGATCGAG TGATGATGGG AAAGAGGATA TTGAACATAC AGGTACCTTG AGACTGAGAG GATTACCTTT CTCAGCAGGA AAGGAAGACA TACTTGACTT CTTCAAAGAT TTCGAGCTGT CTGAAGACTC TGTTCATGTG ACTGTTAATG GTGAAGGGAG ACCCACTGGG GAAGCATTTG TGGAGTTTAG GAATGCAGAA GATTCGCGAG CTGCAATGGT CAAGGATAGG AAGACGCTTG GGAGCCGTTA CATAGAATTG TTTCCTTCAT CGGTTGAAGA GTTAGAGGAG GCACTATCAA GAGGAAGGTG A
Length1071
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8697862.. 8699285
Download Sequence
A.thaliana
AGI-codeAT3G20890.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.31662 Ahg330506 GTP binding;GTP binding
21.8174 Ahg323672 Tetratricopeptide repeat (TPR)-like superfamily protein
26.4575 Ahg924120 NAC domain containing protein 1
34.7275 Ahg471107 sucrose transporter 4
40.398 Ahg477634 O-fucosyltransferase family protein
40.5586 Ahg940670 Protein kinase superfamily protein
48.2494 Ahg943674 transducin family protein / WD-40 repeat family protein
50.3488 Ahg929135 SMAD/FHA domain-containing protein
51.3809 Ahg922436 RING/FYVE/PHD zinc finger superfamily protein
53.2447 Ahg495722 expansin A14
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression