Detail



ID : Ahg323672

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323672|fgenesh1_pm.C_scaffold_5001216
Sequence
ATGATTCTAA GGATAAAGAA TAAAACACCT GCGCCGCTAC AAATCACGTC GGAGCAGATT TTGAGGGAGG CGAGAGAGAG AGAGGACACT CGCCCGAGGC CGCCTAAACA GAAGATCACA GATTCGGCTG AGCTTACGGA CTACAGACTG CGACTAGAAG AATTGGTACT CCGACGTCGG AAGGAGTTTG AGGACAAGAT CCGCGGCGCA AAAACGAACA ATCAAGTTTG GGTGAGGTAT GCGGATTGGG AAGAGTCGCA GAAGGATCAC GATCGTGCTC GGAGCGTTTG GGAACGAGCT TTGAGAGACG AGAGTTACAG GAACCATACG CTCTGGCTCA AATACGCAGA TTTATTCACA TGGAGGAGAT ACTTGGGAAT ATCGCCGGAG CTAGAGAGGT ATTTGAACGG TGGATGGTTT GGTCACCGGA TCAACAAGCT TGGCTCTCTT TTATCAAATT CGAACTTAGG TATAACGAAA TCGAACGCGC AAGATCGATT TACGAGAGAT TTGTGCTTTG CCATCCAAAA GCTTCTTCCT TTATTCGATA TGCCAAGTTT GTGTACGAAC GCGCCATTGA GAGACGTTGA AGAAGAAGCT GAGATGATCT TTGTGGCCTT TGCTGAGTTT GAAGAAGGGT GCAAAGAAGT GGAACGGGCT AGGTTTCTTT ACAAGTTTGC TCTTGATCAT ATCCCTAAAG GAAGAGCTGA GGATTTGTAT AACAAGTTTG TGGCGTTTGA GAAACAGTAT GGGGATAAGG AAGGGATTGA TGATGCCATT GTTGGCAAGA GAAAGCTTCT GTATGAAGGT GAAGTGAGGA AGAACCCTTT GAACTATGAT TCCTGGTTCG ATTACATTAG GTTGGAGGAG ACTTTGGGGA ATAAAGATAG GATCAGAGAT CTCTATGAGA GGGCTATTGC TAATGTTCCA CCCGCCCAGG AGAAACGATA CTGGCAGAGA TATATCTACT TGTGGATTGA TTATGCACTG TTTGAAGAGA TTGTAGCTGA AGACGTGGAG CGTACTCGAG CTGTGTACAG AGAATGCCTT CTGCTTATCC CGCACTCCAA ATTCTCTTTT GCCAAGATAT GGTTGCTCGC TGCACAGTTT GAGATCAGGC AACTGAATCT CTCCGGTGCT CGGCAGATAT TAGGAAACGC CATTGGCAAA GCTCCAAAGC ATAAGATTTT CAAGAAATAC ATTGAGATCG AACTCCGCTT GGGAAACATA GATAGATGTA GAAAACTGTA CACGCGGTAT CTTGAATGGT CTCCTGAGAG TTGCTATGGT ATCTTGAATG GTCTCCTGAG AGTTGCTATG CTTGGATCAA AACGAGCTAG AGCTATTTTT GAACTTGCAA TATCTCAGCC TGTTCTTGAC ACCCCCGAGC TGCTATGGAA GGCATACATT GATTTTGAGA TATCACTAGG GGAATTAGAG AGGACACGAG CTTTATATGA GCGACTCTTG GACCGTACAA AGCATTACAA GGTGTGGCTT AGTTTTGCAA AGTTTGAAGC TTCTGCTGCT CAAGATACTG ATGTTATTCT TGAACACGCC AGAGCGATTT TCGATAGAGC CAACACATAC TACAAAGAGT CCAAACCGGA GCTCAAGGAA GAACGAGCTA AGCTGTTGGA GGATTGGCTG AACATGGAGG CCAGCTTTGG TATTCCCGGG GATGTTAGTG CTGTTCAATC GAAGCTCCCA AAGAAGCTCA AGAAGAGAAA GCCAATCACT AGAGAAGACG GTGAAACAGA GTATGAAGAA TACATTGATT ATTTGTTCCC AGAAGAATCA CAGACGATGA ATCTCAAGAT TCTTGAAGCT GCTCATAAAT GGAAGAAGCA GAAGGTTGCT GCTTTCTGA 
Length1869
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14665704.. 14667587
Download Sequence
A.thaliana
AGI-codeAT3G51110.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg491860 CDK-activating kinase 1AT
20.7846 Ahg945006 pathogenesis related homeodomain protein A
21.8174 Ahg318838 RNA-binding (RRM/RBD/RNP motifs) family protein
23.9165 Ahg903431 lon protease 3
28.9828 Ahg492708 C-terminal domain phosphatase-like 1
34.5254 Ahg494737 Zinc finger C-x8-C-x5-C-x3-H type family protein
35.7071 Ahg480298 Major facilitator superfamily protein
38.9487 Ahg905293 PLANT HOMOLOGOUS TO PARAFIBROMIN
42.5323 Ahg488722
46.4758 Ahg933561 WRKY DNA-binding protein 21
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression