Detail



ID : Ahg495722

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495722|fgenesh2_kg.8__1538__AT5G56320.1
Sequence
ACAACAACAT TGAAACCCCT TTCTTTTTTT TTCTTTCTCC AGGCCATTGT AAAAAAAAGG CAGAGAAAAT GGAGATTTTC GGAAAAGTGA TAATGTCATT GAGTCTTATG ATGATGTTGA TGTGGAAGAG TGTGGATGGT TACAGTAGTG GTTGGGTCAA TGCTCGAGCT ACATTCTATG GAGGTGCTGA TGCTTCTGGC ACCATGGGCG GCGCGTGTGG TTACGGGAAC TTATACAGTC AAGGCTACGG AACGAACACG GCGGCTCTAA GCACGGCTCT ATTCAACGGC GGCCAAGGCT GCGGCGCTTG TTTTCAGATA AAATGCGTAA ACGACCCAAA ATGGTGTCTC CGAGGAACAA TCACCGTCAC CGGAACAAAC TTTTGTCCAC CCAACTTTGC TCAAGCCAAC AACGCCGGAG GTTGGTGTAA TCCTCCTCAA CATCACTTCG ATTTAGCTCA GCCCATCTTC CTCCGCATCG CTCAATACAA AGCCGGTGTC GTCCCCGTCC AATACCGGAG AGTGGCTTGC CGGAGAAAAG GAGGAATAAG ATTCACGATC AACGGTCACT CATACTTCAA CCTCGTACTC ATAACCAACG TCGCCGGCGC CGGAGATGTT GTCTCCGTCT CCATTAAAGG AACCAGAACA GGTTGGCAAA GCATGTCAAG AAACTGGGGA CAGAATTGGC AAAGCAACTC AAATCTTGAT GGTCAAGCTT TGTCCTTTAA AGTAACAACT AGTGATGGCC GTACAGTTGT CTCTAACAAT GCTACTCCGC TTAACTGGAG CTTTGGACAG ACTTATACCG GAAAACAGTT CGGGGCTCAG AGGTGATGAT GACGTGGACT TATTACTGAT TTTGGAGTTT TCTAGAGTTT GCATAGTTTG AAAAAAAGTT TCAGGAGTTT ATCTGATTAA CCCTAATCAA AATAACCAAT TTCTGAATGG CGGAGGTTTT TTATCACCGG CAGCTTTTGT AATTCGCCGG TGAGACTGAG GTGTTTTCAC CCGCCGCTTG AGTAATTGAG 
Length1030
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16404826.. 16406341
Download Sequence
A.thaliana
AGI-codeAT5G56320.1
Descriptionexpansin A14
TAIR curator summarymember of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias[ATEXP14][ATEXPA14][ATHEXP ALPHA 1.5][EXP14][EXPA14][expansin A14][EXPANSIN 14]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg487256 cationic amino acid transporter 6
2.44949 Ahg488458 carboxyesterase 17
3.74166 Ahg939386 Thioredoxin superfamily protein
3.87298 Ahg937893 NAD(P)-binding Rossmann-fold superfamily protein
4.12311 Ahg490604 SKU5 similar 9
4.47214 Ahg941899 Transducin/WD40 repeat-like superfamily protein
4.47214 Ahg890129 PEBP (phosphatidylethanolamine-binding protein) family protein
4.89898 Ahg483093
5.19615 Ahg470140 UDP-Glycosyltransferase superfamily protein
6.32456 Ahg495319 SCARECROW-like 8
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression