| Annotation |
|---|
| Description | jgi|Araly1|321185|fgenesh1_pm.C_scaffold_4001242 |
| Sequence |
ATGGAGGAAG TAGCAGCTAA GGTCGATGAA GAAACTGTGG AAACCACTGT AGAGGACAAT GTAACTACAG CTAATGAAAG TAGAAGTCCA GAAAATGTTT CTGCGGTGTC AAGTCGAGCT GCTGCTACTA AGAAGAAACC AGTTATTAGT TCGAATTTAA TTAAGCCAAC AGCGTCTTCT TCTTTACGGG TCTCAGGTAC TACACCTGTG ACAATCAGGA GAAATAGTAC TGGAGGAGTA ACAGAGAAGT TAGTTGGTGC CTCTAAGGTT CTGCCTAAAC AAATGAGTAC TACTGCCTCA CGTACTGATC CGGTAAGGCG ATCACTTCCA GAATTGAGGA AGAGCTCAAT GTCTTCTCTT TCTGCCAAGA CTGTATCCAA ACCAAGTCTT TCCGAGAGTA AAAAGTCTGT CCCTGTATCA CCAGGGAGTC GGAGTTCGAC AAAGTCACCT GGGTTTAGTT TAAGTAAGCC TGAGTCTTCT GCTAGACCAA GCATGAGTGC CTCTGTGTCT TCAACAAGAG CTCCATCTTC ATCGGTTGAC AGTAGTGGCA GCAGGACCAG TAGTGGAAGA CCACATTCTA CTCTCAATAG TGGGAGGACA GTTTCTAAAG TTTCTTCTCC CTCTGCTGGA TCATCACCTT CTGTTTCTAG CGGTATAAGA TCAAAGTCAT TGTCGACACC TCTAGACCGG AGTTCCAACT TCTCTGGACG GAAGAAAACA GCTACCCCTG AAAGCCGCGA TTCACGACTC ATTATTCTTC CAAAGGTGGA GGTTAAAGCT GGCGATGATA TGAGATTGGA TCTTAGAGGC CACAGGATTC GCAGTCTAAC CTCTGGGGGG CTACACTTGT CACCAAACTT AGAGTTTGTC TATCTTAGAG ACAATCTCCT ATCTACGCTG GAAGGTATTG AGATATTGAA TCGAGTCAAG GTTCTGGATT TGAGTTTTAA TGATTTCAAA GGGCCTGGAT TTGAACCACT TGAGAATTGC AAAATGCTGC AGCAACTTTA TCTTGCTGGA AATCAGATAA CTTCACTTGC TAGTCTGCCT CAACTTCCAA ACTTAGAGTT TCTCTCGGTA GCTCAAAATA AATTAAAATC ACTTGCAATG GCAAGCCAGC CCCGGCTTCA GGTACTAGCA GCAAGTAAGA ACAAGATAAC AACTCTGAAG GACTTTCCAT ATCTACCAGT TCTTGAGCAT CTGCGGGTTG AGGAAAATCC ATTGCTGAAA ATTTCTCATT TGGAAGCGGC ATCCATACTA CTCATAGGTC CTACCTTGAA GAAATTCAAT GACAGAGATC TCTCTCGTGA GGAAGTGACA ATTGCAAAGC GTTATCCTCC ACAAACAGCC CTCTGCCTCA GAGAAGGTTG GGAGTTCTGC AAGTCTGATC TTGCAGCAGA ATCGACATTC CGCTTCTTAG TTGAGAGGTG GAAGGACACA TTACCTTCTG GTTATCTTAT TAAAGAAGCA CATGTTGACC GACCTTCTGA AGAAGCTCCC TGTCAATGTC ACTTTGGTCT TGTTCAGGAA CTTCCTACTG CTACAGATCA AGAATTAGCC CTGAAATTTC AATGGTCTGT GGCGGACAGA TCTCTTTCTA ATTTTGTTCC TATTCTTGAT GCAACCAAGG AGGTCTATTG GCCAAAACGT GAAGACATTG GTAAAATGCT AAAGATAGAA TGTACTCCTG TTATGGGAGA GACTGAATAT CCATCCATAT TTGCCATATC TTCACCAGTT CAGCGAGGAA AGGGAATACC AAAAGTTGTG AGCCTTGAAT TAAATGGGGA ACTAGTTGAG GGAAATATTA TCAAGGGTCA AGCAGTGGTT GCATGGTGTG GTGGGACACC GGGAAAATGT ATTACCAGTT GGTTGAGGAG AAAGTGGAAC GGGAGCCCTG TGGTGATTGA TGGAGCTGAA GATGAGGAAT ATATGTTATC TTTAGATGAT GTGGGATCAA GTATGGTTTT CATGTACACA CCAGTCACAG AAGGAGGTGC AAGAGGAGAG CCTCAGTACA AGTACACAGA GTTCGTAAAA GCAGCTCCTC CATCTGTAAG TAATGTTCGA ATTACTGGAG ATGCTGTTGA AGGCTGCGTT TTAAAGGGGG TTGGAGATTA TTTTGGAGGC AAGGAAGGTC CTAGCAAGTT CAAATGGTTA CGGAAGAACA AGGAAACAGG AGAACTCTCC TTGATATCGG CTGGAACATC CGAGTATACA TTGACCCAGG AAGATGTTGG CACACATGTC ACTTTTGTGT ACATACCTGC AAATTTTGAG GGGCTAGAGG GGGAACCAGT GTCAACTTCA TCCAGTGTAA TCAACCCAGC ACCTCCGAAA GTAACAGATG CTAAGATAGT TGGTGATTTA AGGGAGAATA GTAAGGTCAC TGTAACAGGT ACTGTTACTG GAGGAACTGA AGGTTCAAGC AGAGTGCAAT GGTTCAAATC AAGTTGTTCT ATTCTAGAAG GAGGCAATTC TCTTGAAGAA TTGAGCACAT CAAAAGTGGC AAAGTCATTC CGTATACCAT TGGGGGCGGT GGGCTATTTC ATAGTTGCGA AGTATACTCC AATGACACCT GATGGTGAAT GCGGTGAACC AGTATATGTA CTATCGGAAA GAGCAGTTGA GACCCTTCCC CCCAGCTTAA ATTTCCTGTC AATTACTGGA GACAATATCG AGGGTGGAAT ATTGACAGCA TCCTATGGAT ACATAGGGGG GCATGAAGGT AAAAGCATAT ACGAATGGCA TTATCATAAG GCAGAAAATG ATCTCCCTGG CACATTGATA CCTGAAGCCT CTGGGCTTCT TCAGTATACG ATTACTAAAG AAGCTATTGG TAAATTCATT TCATTTCAAT GTATTCCTAT GAGGGATGAT GGGATTGTGG GTGAGCCAAG AAATTGCATG TCCCAGGAAC GTGCTCGTCC AGGAAACCCA AGCGCGGTAT CTCTTCAAGT TGTTGGAGCT CCTGTTGAAG GAACCATGCT ATATGCAGAG AAAGAATATT GGGGTGGTGA AGAAGGAGCA TCAGTTTTCC GGTGGTTCCG GACTAATTCA GATGGTACTC CATGCGAAAT AAAGGGTGCA ACTACTTCGT CATATCTGCT GTCAGTCGAT GATATCGGTT TCTTCATTTC GGTTTCTTAT GAACCCATGA GAAATGACAT GGCTCGTGGA CCCACGGTTA TTTCTGAACT ATCTGGACCA ATTGTAGCTG GCCATCCAAA TTGTCAGTCA CTGGAGTTTC TTGGATCAAT GATTGAAGGG CAACGCTTGA GCTTTGTTGC TTCATATACT GGAGGGATAA AAGGAAATTG CTACCTTGAA TGGGTTAGGG TGAAAAGTAA TGGTGTTAAG GAAATATTGA GTAATGATGA GTTTTTGGAT TTATCACTGG ACGATGTTGG GGAAAGCATT GAACTTATTT ACACTCCTGT TCGTGAAGAT GGAATAGAAG GGAGTCCAAG GAGTATCAGG TCTGATGGCA TTGCTCCAGC AAATCCGATG GGGTTGGAGC TTAAAATTCC TGACTGCCGT GAGAAACAAG AGGTTGTGCC TCATAAAACT TATTTTGGAG GCCATGAAGG TGTTGGAGAG TACATCTGGT ATAGAACTAA GGTCAAGTTG CATGGATCTG CACTCACGGA AATATCCTAT GCCGGTGAAG AGGTTGTTGC TTGTAGTAGA ACATTAAAAT ATACTCCATC ACTTGAAGAT GTGGGCGCTT ATCTAGTCTT GTACTGGATT CCTACTCGCG TAGATGGGAG AAGTGGGAAG CCAGTTGTTT CGATAACAAA CTCTCTTGTT GCCCCAGCTG ATCCAGAAGT ATCTAATGTT CGTGTGAAGA AACTTTTTTC GGATGCTTAT TCTGGAGAAG GAGAGTACTT TGGTGGCCAT GAAGGTGCTA GTATCTTCAG TTGGTACAGA GATAATGATG GAAACATTGA TCTTATTGCT GGGGCTAACT CCAAAACGTA TGAGGTGACT GAGTCGGATT ACAATTGCCG AATATTGTTT GGGTACACAC CTGTTCGTTC AGATTCTGTT GTGGGAGAGT TAAAGATGTC CGAGCCAACT GAAATTATCC TCCCAGAGGT TCCAAAAGTA GACATGCTTG CTTTCACCGG AAAGGCGGTA CAGGGTGATG TTCTCACAGC CGTCCAAGTG ATCCCAAAGA CTGAAATTCA ACAACTTGTT TGGAGCAAGT ACAAAGGAGA AATTCAATAC CAATGGTTCC GCTCACCGGA ATCAGGGGAT AAGATTTCGT ATGAGGCTCT CTCTTCAGAA ACTTCGTGTT CATACAGGGT GCGGTTTGAG GATATTGGCA GATGTCTCAA ATGTGAATGT GTAGTACATG ATGTGTTTGG AAGGTCTAGT GAACTAGCAT ACGCCGAGAC TGATCCAATA TTACCAGGTT TTCCTAGGAT AGAGAAGCTA GAGATTGAAG GACAAGGTTT TCATACTAAC TTATATAGTG TGCGGGGAAA TTATTTTGGT GGTAAAGAGG GAAAGAGTAA AATCCAATGG CTTAGATCAA TGGTTGGAAG CCCTGATCTC ATCTCAATTC CAGGTGAGAC AGGAAGGATG TATGAAGCTA ATGTGGATGA TGTCGGATAC AGACTGGTCG TTGTATATAC ACCCATCCGT GAGGATGGTG TTCAAGGCCA CCCAGTTTCT GCATCAACAG AGCCTGTTGC TGTTGAACCT GACCTTTATA AGGAAGTGAA GCAGAAACTA GAAACCGGGT TAGTGAAGTT TGAGGTGTTG TGTGACAAGG ACCCTTATCC CAAAAAGATT GTGGGAGAGG GAAATCTCGA GAGACGAATG CTGGAAATGA ACAGGAAGAG AATAAAGGTT GTAAAACCAG GTTCAAAGAC GTCTTTCGCA ACTACTGAAG TCCGTGGAAG CTATGGTCCT CCTTTCCACG TGGAGACATT TCGTAATGAC CAGAGAAGGC TAAGGATAGT TGTGGATAGT GAGAATGAAG TAGACATAGT GGTGCATTCG CGCCATCTCC GCGATGTTAT AGTGCTTGTC ATTCGCGGGT TTGCTCAGCG ATTCAACAGC ACTTCACTCA ATTCTCTACT TAAGATCGAT ACATGA |
| Length | 5106 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 15597064.. 15607249 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G34680.1 |
| Description | Outer arm dynein light chain 1 protein |
| TAIR curator summary | isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular. |
| Alias | [AIR9][AUXIN-INDUCED IN ROOT CULTURES 9] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.3923 |
Ahg471399 | Nucleotide-sugar transporter family protein |
| 16.2481 |
Ahg496019 | Plant protein of unknown function (DUF641) |
| 17.4929 |
Ahg470115 | plasma membrane intrinsic protein 1C |
| 17.7482 |
Ahg349416 | Glycosyl hydrolase superfamily protein |
| 18.5472 |
Ahg923183 | receptor-like kinase 1 |
| 18.6011 |
Ahg484657 | ATP binding cassette subfamily B19 |
| 20.5913 |
Ahg496474 | Xanthine/uracil permease family protein |
| 22.9783 |
Ahg324161 | myosin heavy chain-related |
| 23.6432 |
Ahg475658 | beta-hexosaminidase 3 |
| 25.3969 |
Ahg485553 | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|