Detail



ID : Ahg349416

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|349416|fgenesh1_pg.C_scaffold_6000009
Sequence
ATGAAGGACC AACTTGGATT CAGAATCGTG CTCTGTTCTG CGATTTTCAT AATTCTGACA CAAAACAGAG CTCTCGCAGA CTTGGACAGC GAGTCCCACG GGGTTAACTC AGAATCAGTA GGAGAAGAAG AATGGGAGAT GGTGCAGAGG AAAGGGATGC AATTCACCCT AAATGGACAA CCATTCTATG TGAATGGCTT CAACACGTAC TGGATGATGA CTCTTGCAGC TGACAATTCC ACGAGAGGCA AAGTGACGGA AGTGTTCCAA CAAGCCTCCG CGGTTGGAAT GACAGTAGGC AGGACATGGG CTTTCAACGA CGGCCAATGG AGAGCTCTCC AGAAATCTCC CTCTGTTTAC GATGAAGAGG TCTTCAAGGC CCTCGACTTC GTGGTGAGCG AGGCCAGAAA GTACAAGATC AGGCTTATAC TGTCATTGGT CAACAACTGG GACGCCTATG GCGGCAAAGC TCAGTACGTT AAATGGGGCA ACGCCTCCGG CCTTAATCTC ACCTCCGACG ACGACTTCTT CACCAACCCC ACCCTCAGAA ACTTCTACCA ATCCCATGTC CGGACAGTGC TGAATAGAGT CAACACCTTC ACAAACATAA CTTACAAGAA CGACCCCACC ATCTTCGCCT GGGAACTCAT GAATGAGCCT CGTTGCCCCT CTGATCCCTC TGGTGACAAA CTCCAGTCTT GGATACAAGA AATGGCGGTG TTTGTGAAGA GCTTAGACGC TAAACATTTG GTGGAGATCG GACTTGAAGG CTTCTATGGT CCCTCTGCCC CTGTGAGAAC CAGATTCAAT CCCAATCCCT ACGCTGCACA AGTCGGAACT GACTTCATCA GAAATAATCA GGTTCTTGGC ATCGATTTTG CTTCGGTTCA CGTCTATCCA GATTCCTGGA TATCTCCGGC AGTATCAAAT TCTTTCCTGG AATTCACTAG CTCTTGGATG CAAGCTCATG TGGAGGACGC AGAGATGTAC TTGGGAATGC CGGTTCTGTT CACAGAGTTT GGTGTGTCTG CACATGACCC TGGTTTCAAC ACGTCTTTCC GCGACATGAT GTTGAATACG GTGTACAAGA TGACCCTCAA CTCAACAAGG AAAGGAGGGG CTGGTGCCGG GAGTCTGGTC TGGCAGGTCT TCCCTCAGGG GGCAGAGTTC ATGGATGACG GCTATGCGGT TTACCTCACA AGAGCTCACA CCGCTTCAAA AATCATATCT CTGCAGTCGA AGCGACTAGC CATCTTCAAC TCCTTGTGTA GCTGGAGATG CAGGTGGGGA TGCAAGAAAA AGAATCACAC TGCTCTTGAT GCCCTCCTGA CGCACGACGA GCTTTAA 
Length1347
Protein Sequence
Protein Residue
Map Locationscaffold_6: 33674.. 35378
Download Sequence
A.thaliana
AGI-codeAT5G01930.1
DescriptionGlycosyl hydrolase superfamily protein
TAIR curator summary
Alias[AtMAN6][MAN6][endo-beta-mannase 6]
Gene coexpression
MR
MR Locus Description
4.12311 Ahg941965 prolyl oligopeptidase family protein
17.7482 Ahg321185 Outer arm dynein light chain 1 protein
17.9165 Ahg311338 translocon at the outer envelope membrane of chloroplasts 33
26.1151 Ahg476161 beta carbonic anhydrase 4
37.6829 Ahg477625 Leucine-rich repeat protein kinase family protein
40.398 Ahg473903 Pentatricopeptide repeat (PPR) superfamily protein
43.4166 Ahg917379
52.1153 Ahg493467 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
53.1037 Ahg317213 dicer-like 2
64.8768 Ahg488540 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression