| Annotation |
|---|
| Description | jgi|Araly1|484657|fgenesh2_kg.5__649__AT3G28860.1 |
| Sequence |
TCTCATCACT TCAAAACAAG ACACTCGTAG AAGAGTTCTT GAACTTCACA AAACAATTTT CAAGAAAAAC TTTTTAAACA AAAAACATTT TATTCTCTCT CTCTCTGCTC AATGATCTCG TTTTCTCACT GAGCCAACTC GTTTCTTCTT TCTTTCTTTA ACTCGGATCT AAAAAACCAT GTCGGAACCT AACACGACCG ATGCCAAGAC TGTTCCGGCA GAAGCAGAGA AGAAGAAAGA ACAGAGTTTA CCATTCTTTA AACTCTTCTC TTTCGCTGAT AAATTTGATT ATCTCTTAAT GTTCGTTGGT TCTCTTGGTG CCATTGTTCA TGGCTCTTCC ATGCCTGTCT TTTTTTTACT GTTTGGTCAA ATGGTTAATG GATTTGGTAA AAACCAAATG GATTTACATC AAATGGTTCA TGAAGTCTCA AAATATTCTC TGTATTTCGT CTACTTGGGT TTGGTCGTTT GCTTCTCTTC ATACGCAGAG ATAGCATGTT GGATGTATTC TGGAGAAAGA CAAGTAGCAG CATTAAGGAA GAAATATCTT GAAGCAGTAT TAAAACAAGA CGTTGGGTTC TTTGATACTG ATGCAAGAAC TGGTGACATT GTCTTTAGTG TTTCTACTGA TACTCTTCTT GTTCAAGATG CCATTAGTGA AAAGGTTGGA AACTTTATAC ATTACCTATC AACATTTTTG GCGGGACTAG TCGTTGGATT TGTATCAGCA TGGAAATTAG CTTTGTTAAG TGTTGCGGTG ATTCCCGGAA TCGCTTTCGC CGGAGGTTTA TACGCTTATA CACTCACCGG AATTACTTCA AAGAGCCGTG AATCTTATGC TAACGCCGGC GTTATCGCCG AGCAGGCAAT TGCTCAAGTT CGAACTGTTT ACTCTTATGT TGGAGAGAGT AAGGCACTTA GTTCGTATTC GGATGCGATT CAGTATACGC TTAAGCTCGG TTATAAAGCT GGGATGGCTA AAGGATTGGG TTTAGGATGT ACTTATGGAA TAGCTTGTAT GTCATGGGCT TTGGTGTTTT GGTATGCCGG GGTTTTTATT CGGAATGGGC AGACCGATGG AGGAAAGGCG TTTACGGCTA TATTCTCTGC CATTGTTGGT GGAATGAGTT TGGGACAATC TTTCTCCAAT CTTGGGGCTT TTAGTAAAGG TAAAGCGGCT GGTTACAAGC TGATGGAGAT AATTAACCAG AGACCGACGA TAATTCAAGA CCCGTTAGAC GGAAAATGCT TGGATCAAGT TCATGGGAAC ATTGAGTTTA AAGATGTGAC TTTTAGCTAT CCTTCACGGC CTGATGTTAT GATATTCAGA AACTTTAATA TTTTCTTTCC TTCTGGGAAA ACTGTGGCGG TTGTTGGTGG GAGTGGCTCT GGAAAGAGTA CTGTTGTTTC CCTCATTGAG AGATTCTACG ATCCAAACAG CGGGCAAATT CTGTTGGATG GTGTTGAAAT AAAGACTCTT CAGTTGAAGT TTTTGCGCGA ACAAATCGGG CTTGTGAATC AAGAACCAGC TCTGTTTGCC ACCACCATAC TTGAGAACAT ACTCTACGGA AAGCCTGATG CAACAATGGT TGAAGTTGAA GCTGCTGCTT CCGCTGCGAA TGCGCATAGT TTCATTACAT TGCTTCCTAA AGGTTATGAC ACACAGGTTG GAGAACGTGG AGTTCAACTA TCAGGTGGAC AGAAACAGAG AATTGCAATT GCTAGGGCAA TGTTGAAAGA CCCAAAGATT CTGTTACTAG ATGAAGCTAC AAGTGCTCTT GATGCTAGCT CTGAGAGCAT TGTTCAGGAA GCTTTAGACA GAGTCATGGT AGGCAGGACC ACTGTGGTTG TTGCTCATCG TCTCTGCACC ATCAGAAATG TTGATTCCAT TGCCGTGATA CAACAAGGCC AAGTTGTTGA AACCGGAACA CATGAAGAAC TCATTGCCAA ATCCGGTGCT TACGCATCCC TCATCAGGTT TCAAGAAATG GTTGGTACTC GAGATTTCTC AAATCCGTCA ACTCGTCGCA CTCGTTCAAC CCGTTTGAGC CATTCTCTGT CAACAAAATC ACTCAGTTTA AGATCAGGAA GTTTGAGGAA TCTGAGCTAT TCGTACAGCA CTGGAGCTGA TGGTCGGATA GAGATGATTT CAAATGCAGA GACGGACCGA AAGACTCGCG CCCCTGAAAA TTACTTCTAC AGGCTTCTCA AGCTTAATTC ACCTGAATGG CCTTACTCCA TCATGGGAGC CATTGGCTCG ATTCTTTCTG GTTTCATCGG ACCTACATTT GCTATTGTGA TGAGTAATAT GATCGAAGTC TTCTACTACA CAGACTACAA TTCAATGGAG AGAAAAACAA AGGAATACGT TTTCATCTAC ATCGGTGCTG GTCTCTACGC TGTGGGTGCT TATTTGATCC AACATTACTT CTTTAGCATC ATGGGAGAAA ACCTCACAAC AAGAGTAAGA AGAATGATGC TCTCAGCTAT CTTGAGAAAC GAAGTTGGTT GGTTCGATGA GGATGAACAC AACTCAAGCC TGATCGCTGC ACGGTTAGCT ACTGATGCAG CCGATGTTAA ATCCGCTATA GCCGAGAGAA TCTCAGTAAT TCTACAAAAC ATGACTTCAC TTCTCACATC CTTCATAGTT GCCTTCATAG TAGAATGGAG AGTCTCACTT CTCATCTTAG GCACATTCCC ACTTCTAGTC CTCGCCAACT TTGCTCAGCA ACTATCTTTG AAGGGTTTTG CTGGAGATAC AGCCAAGGCG CATGCAAAGA CTTCAATGAT TGCTGGTGAA GGAGTTAGCA ACATTAGAAC TGTAGCAGCG TTCAATGCAC AGAGCAAAAT TCTCTCTTTG TTCTGTCACG AGCTTCGTGT TCCTCAGAAA AGAAGTTTAT ACCGGAGTCA AACCTCGGGT TTCCTATTTG GCCTCTCGCA GCTTGCTCTA TATGGTTCTG AGGCTTTGAT TCTCTGGTAT GGCGCCCACC TTGTGAGCAA AGGCGTGTCA ACCTTTTCCA AAGTGATCAA AGTGTTTGTG GTTTTGGTCA TTACTGCAAA CTCTGTTGCT GAAACTGTCA GCCTTGCTCC TGAAATTATC CGGGGAGGTG AAGCGGTTGG TTCGGTTTTC TCGGTATTGG ATAGGCAAAC TCGGATTGAC CCGGATGATG CTGATGCTGA TCCCGTTGAA ACAATCCGTG GAGACATAGA GTTTAGGCAT GTGGATTTCG CTTACCCTTC AAGACCAGAT GTCATGGTTT TCAGGGACTT TAACCTCAGA ATCCGAGCTG GACATAGCCA AGCTCTAGTG GGCGCAAGTG GGTCAGGGAA GAGTTCTGTA ATCGCGATGA TTGAGCGGTT TTATGACCCG CTTGCTGGAA AAGTCATGAT TGATGGCAAA GATATCCGCC GGCTAAACCT GAAATCTCTA AGGCTCAAAA TCGGTCTTGT TCAACAAGAA CCAGCTCTTT TCGCAGCAAC CATCTTCGAC AACATCGCAT ATGGGAAAGA TGGTGCAACT GAATCCGAGG TAATTGAGGC AGCGCGGGCC GCAAATGCTC ATGGTTTCAT CAGTGGTTTG CCTGAAGGTT ACAAAACTCC AGTGGGCGAA AGAGGAGTGC AGTTATCAGG TGGACAGAAA CAGAGGATCG CGATAGCAAG AGCTGTGCTC AAGAACCCTA CAGTGTTGCT TCTAGACGAA GCAACTAGCG CACTAGATGC AGAATCAGAA TGCGTGCTGC AAGAGGCATT AGAGAGGCTC ATGAGAGGTC GGACAACCGT GGTAGTTGCT CACCGCTTGT CCACCATAAG AGGTGTTGAT TGCATTGGTG TGATTCAAGA CGGGCGGATT GTGGAGCAAG GCAGCCATTC CGAGCTCGTA AGCCGACCAG AGGGAGCGTA TTCAAGGCTT TTACAGCTTC AAACGCATAG GATTTGAAGC TTGATCATGG TTTAAAAACA AAAAAAAATC GGTTTCTGTA ATTTTTTTTA AATCAAAACT TTAATTTGGA AGATTTCGAT GGACTATAAC GATAATATGG ATAGGTGTAG ATAATGAAGC TTTTGCTTAT GAAGGTTCTT TAAGGGGTTT TCTTTTTTCG CATTTGCTTA TGTGCCCGTT TTGGAACATG AGACTAAACT ATGTTTTCGT T |
| Length | 4151 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 4698925.. 4706205 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G28860.1 |
| Description | ATP binding cassette subfamily B19 |
| TAIR curator summary | Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1. |
| Alias | [ABCB19][ATABCB19][ATMDR1][ATMDR11][ATPGP19][MDR1][MDR11][PGP19][ATP-binding cassette B19][Arabidopsis thaliana ATP-binding cassette B19][MULTIDRUG RESISTANCE PROTEIN 11][P-GLYCOPROTEIN 19] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.38516 |
Ahg482819 | Transmembrane amino acid transporter family protein |
| 7.34847 |
Ahg913522 | Patched family protein |
| 13.9642 |
Ahg476699 | Walls Are Thin 1 |
| 18.6011 |
Ahg321185 | Outer arm dynein light chain 1 protein |
| 20.7123 |
Ahg478767 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
| 23.5584 |
Ahg477346 | alpha/beta-Hydrolases superfamily protein |
| 23.6643 |
Ahg939349 | Protein of unknown function (DUF1645) |
| 29.4109 |
Ahg483695 | Protein kinase superfamily protein |
| 41.833 |
Ahg472299 | Protein kinase superfamily protein |
| 43.4741 |
Ahg496541 | farnesylated protein 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|